Analysis of Ligand-Protein Contacts in PDB entry:
8D88


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 8D88. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DMS
A
501 4DIMETHYL SULFOXIDE
lig 2
EDO
A
502 41,2-ETHANEDIOL
lig 3
N2P
A
503 7PENTANE-1,5-DIAMINE
lig 4
R1O
A
504 25 METHYL]PYRIDIN-4-YL}METHYL)-D-LYSINE
lig 5
DMS
A
505 4DIMETHYL SULFOXIDE
lig 6
DMS
A
506 4DIMETHYL SULFOXIDE
lig 7
NA
A
507 1SODIUM ION
lig 8
NA
A
508 1SODIUM ION
lig 9
CL
A
509 1CHLORIDE ION
lig 10
DMS
B
501 4DIMETHYL SULFOXIDE
lig 11
EDO
B
502 41,2-ETHANEDIOL
lig 12
GOL
B
503 6GLYCEROL
lig 13
R1O
B
504 25 METHYL]PYRIDIN-4-YL}METHYL)-D-LYSINE
lig 14
DMS
B
505 4DIMETHYL SULFOXIDE
lig 15
DMS
B
506 4DIMETHYL SULFOXIDE
lig 16
NA
B
507 1SODIUM ION
lig 17
NA
B
508 1SODIUM ION
lig 18
CL
B
509 1CHLORIDE ION