Analysis of Ligand-Protein Contacts in PDB entry:
8D9R


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 36 ligands in PDB entry 8D9R. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GTP
C
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
MG
C
1002 1MAGNESIUM ION
lig 3
GTP
H
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 4
MG
H
1002 1MAGNESIUM ION
lig 5
GTP
Z
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 6
MG
Z
1002 1MAGNESIUM ION
lig 7
GTP
J
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 8
MG
J
1002 1MAGNESIUM ION
lig 9
GTP
X
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 10
MG
X
1002 1MAGNESIUM ION
lig 11
GTP
3
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 12
MG
3
1002 1MAGNESIUM ION
lig 13
GTP
K
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 14
MG
K
1002 1MAGNESIUM ION
lig 15
GTP
a
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 16
MG
a
1002 1MAGNESIUM ION
lig 17
GTP
4
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 18
MG
4
1002 1MAGNESIUM ION
lig 19
GTP
O
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 20
MG
O
1002 1MAGNESIUM ION
lig 21
GTP
b
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 22
MG
b
1002 1MAGNESIUM ION
lig 23
GTP
5
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 24
MG
5
1002 1MAGNESIUM ION
lig 25
GTP
P
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 26
MG
P
1002 1MAGNESIUM ION
lig 27
GTP
c
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 28
MG
c
1002 1MAGNESIUM ION
lig 29
GTP
6
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 30
MG
6
1002 1MAGNESIUM ION
lig 31
GTP
Q
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 32
MG
Q
1002 1MAGNESIUM ION
lig 33
GTP
d
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 34
MG
d
1002 1MAGNESIUM ION
lig 35
GTP
7
1001 32GUANOSINE-5'-TRIPHOSPHATE
lig 36
MG
7
1002 1MAGNESIUM ION