Analysis of Ligand-Protein Contacts in PDB entry:
8DBM

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 48 ligands in PDB entry 8DBM. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	PRP	A	401	22	1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RI
lig 2	PO4	A	402	5	PHOSPHATE ION
lig 3	MG	A	403	1	MAGNESIUM ION
lig 4	MG	A	404	1	MAGNESIUM ION
lig 5	PRP	B	401	22	1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RI
lig 6	PO4	B	402	5	PHOSPHATE ION
lig 7	MG	B	403	1	MAGNESIUM ION
lig 8	MG	B	404	1	MAGNESIUM ION
lig 9	PRP	C	401	22	1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RI
lig 10	PO4	C	402	5	PHOSPHATE ION
lig 11	MG	C	403	1	MAGNESIUM ION
lig 12	MG	C	404	1	MAGNESIUM ION
lig 13	PRP	D	401	22	1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RI
lig 14	PO4	D	402	5	PHOSPHATE ION
lig 15	MG	D	403	1	MAGNESIUM ION
lig 16	MG	D	404	1	MAGNESIUM ION
lig 17	PRP	E	401	22	1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RI
lig 18	PO4	E	402	5	PHOSPHATE ION
lig 19	MG	E	403	1	MAGNESIUM ION
lig 20	MG	E	404	1	MAGNESIUM ION
lig 21	PRP	F	401	22	1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RI
lig 22	PO4	F	402	5	PHOSPHATE ION
lig 23	MG	F	403	1	MAGNESIUM ION
lig 24	MG	F	404	1	MAGNESIUM ION
lig 25	PRP	G	401	22	1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RI
lig 26	PO4	G	402	5	PHOSPHATE ION
lig 27	MG	G	403	1	MAGNESIUM ION
lig 28	MG	G	404	1	MAGNESIUM ION
lig 29	PRP	H	401	22	1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RI
lig 30	PO4	H	402	5	PHOSPHATE ION
lig 31	MG	H	403	1	MAGNESIUM ION
lig 32	MG	H	404	1	MAGNESIUM ION
lig 33	PRP	I	401	22	1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RI
lig 34	PO4	I	402	5	PHOSPHATE ION
lig 35	MG	I	403	1	MAGNESIUM ION
lig 36	MG	I	404	1	MAGNESIUM ION
lig 37	PRP	J	401	22	1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RI
lig 38	PO4	J	402	5	PHOSPHATE ION
lig 39	MG	J	403	1	MAGNESIUM ION
lig 40	MG	J	404	1	MAGNESIUM ION
lig 41	PRP	K	401	22	1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RI
lig 42	PO4	K	402	5	PHOSPHATE ION
lig 43	MG	K	403	1	MAGNESIUM ION
lig 44	MG	K	404	1	MAGNESIUM ION
lig 45	PRP	L	401	22	1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RI
lig 46	PO4	L	402	5	PHOSPHATE ION
lig 47	MG	L	403	1	MAGNESIUM ION
lig 48	MG	L	404	1	MAGNESIUM ION

Analysis of Ligand-Protein Contacts in PDB entry: 8DBM

Analysis of Ligand-Protein Contacts in PDB entry:
8DBM