Analysis of Ligand-Protein Contacts in PDB entry:
8DCB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 8DCB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GLC
C
1 11ALPHA-D-GLUCOPYRANOSE
lig 2
FRU
C
2 12BETA-D-FRUCTOFURANOSE
lig 3
GLC
D
1 11ALPHA-D-GLUCOPYRANOSE
lig 4
FRU
D
2 12BETA-D-FRUCTOFURANOSE
lig 5
GTP
A
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 6
GOL
A
502 6GLYCEROL
lig 7
NI
A
503 1NICKEL (II) ION
lig 8
NI
A
504 1NICKEL (II) ION
lig 9
SO4
A
505 5SULFATE ION
lig 10
SO4
A
506 5SULFATE ION
lig 11
SO4
A
507 5SULFATE ION
lig 12
SO4
A
508 5SULFATE ION
lig 13
SO4
A
509 5SULFATE ION
lig 14
CL
A
510 1CHLORIDE ION
lig 15
GTP
B
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 16
NI
B
502 1NICKEL (II) ION
lig 17
NI
B
503 1NICKEL (II) ION
lig 18
NI
B
504 1NICKEL (II) ION
lig 19
SO4
B
505 5SULFATE ION
lig 20
SO4
B
506 5SULFATE ION
lig 21
SO4
B
507 5SULFATE ION
lig 22
SO4
B
508 5SULFATE ION
lig 23
SO4
B
509 5SULFATE ION
lig 24
CL
B
510 1CHLORIDE ION