Analysis of Ligand-Protein Contacts in PDB entry:
8DCD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 8DCD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GLC
C
1 11ALPHA-D-GLUCOPYRANOSE
lig 2
FRU
C
2 12BETA-D-FRUCTOFURANOSE
lig 3
GLC
D
1 11ALPHA-D-GLUCOPYRANOSE
lig 4
FRU
D
2 12BETA-D-FRUCTOFURANOSE
lig 5
GTP
A
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 6
GOL
A
502 6GLYCEROL
lig 7
SO4
A
503 5SULFATE ION
lig 8
SO4
A
504 5SULFATE ION
lig 9
SO4
A
505 5SULFATE ION
lig 10
SO4
A
506 5SULFATE ION
lig 11
SO4
A
507 5SULFATE ION
lig 12
SO4
A
508 5SULFATE ION
lig 13
SO4
A
509 5SULFATE ION
lig 14
SO4
A
510 5SULFATE ION
lig 15
SO4
A
511 5SULFATE ION
lig 16
SO4
A
512 5SULFATE ION
lig 17
ZN
A
513 1ZINC ION
lig 18
ZN
A
514 1ZINC ION
lig 19
CL
A
515 1CHLORIDE ION
lig 20
CL
A
516 1CHLORIDE ION
lig 21
GTP
B
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 22
GOL
B
502 6GLYCEROL
lig 23
SO4
B
503 5SULFATE ION
lig 24
SO4
B
504 5SULFATE ION
lig 25
SO4
B
505 5SULFATE ION
lig 26
SO4
B
506 5SULFATE ION
lig 27
SO4
B
507 5SULFATE ION
lig 28
SO4
B
508 5SULFATE ION
lig 29
ZN
B
509 1ZINC ION
lig 30
ZN
B
510 1ZINC ION