Analysis of Ligand-Protein Contacts in PDB entry:
8DGS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 10 ligands in PDB entry 8DGS. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
365 10PHOSPHOSERINE
lig 2
SEP
A
729 10PHOSPHOSERINE
lig 3
AGS
A
801 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 4
ZN
A
802 1ZINC ION
lig 5
ZN
A
803 1ZINC ION
lig 6
AGS
B
801 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 7
MG
B
802 1MAGNESIUM ION
lig 8
LCJ
B
803 25 IMIDAZO[1,5-A]PYRIDINE-6-CARBOXAMIDE
lig 9
MG
E
201 1MAGNESIUM ION
lig 10
GNP
E
202 32PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTE