Analysis of Ligand-Protein Contacts in PDB entry:
8DH6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 8DH6. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CA
a
601 1CALCIUM ION
lig 2
MG
a
602 1MAGNESIUM ION
lig 3
CU
a
603 1COPPER (II) ION
lig 4
HEA
a
604 60HEME-A
lig 5
HEA
a
605 60HEME-A
lig 6
PEF
a
606 33DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 7
PEF
a
607 47DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 8
PEF
b
301 47DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 9
PEF
b
302 33DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 10
CU
b
303 1COPPER (II) ION
lig 11
PEF
b
304 40DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 12
PEF
c
301 36DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 13
PEF
c
302 41DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 14
ZN
d
201 1ZINC ION
lig 15
PEF
e
201 47DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 16
PEF
g
101 47DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
lig 17
PEF
h
101 47DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE