Analysis of Ligand-Protein Contacts in PDB entry:
8DIN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 8DIN. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
D
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
GAL
D
6 11BETA-D-GALACTOPYRANOSE
lig 7
MAN
D
7 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
D
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
FUC
D
9 10ALPHA-L-FUCOPYRANOSE
lig 10
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 13
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
E
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
GAL
E
6 11BETA-D-GALACTOPYRANOSE
lig 16
MAN
E
7 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
E
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
FUC
E
9 10ALPHA-L-FUCOPYRANOSE
lig 19
MG
A
501 1MAGNESIUM ION