Analysis of Ligand-Protein Contacts in PDB entry:
8DN5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 52 ligands in PDB entry 8DN5. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GLY
D
501 5GLYCINE
lig 2
NAG
D
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
DD9
D
503 9NONANE
lig 4
HP6
D
504 7HEPTANE
lig 5
HEX
D
505 6HEXANE
lig 6
HP6
D
506 7HEPTANE
lig 7
HP6
D
507 7HEPTANE
lig 8
HEX
D
508 6HEXANE
lig 9
HEX
D
509 6HEXANE
lig 10
HEX
D
510 6HEXANE
lig 11
HEX
D
511 6HEXANE
lig 12
UND
D
512 11UNDECANE
lig 13
GLY
A
501 5GLYCINE
lig 14
NAG
A
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
UND
A
503 11UNDECANE
lig 16
UND
A
504 11UNDECANE
lig 17
DD9
A
505 9NONANE
lig 18
HP6
A
506 7HEPTANE
lig 19
HEX
A
507 6HEXANE
lig 20
NBU
A
508 4N-BUTANE
lig 21
DD9
A
509 9NONANE
lig 22
NBU
A
510 4N-BUTANE
lig 23
UND
A
511 11UNDECANE
lig 24
UND
A
512 11UNDECANE
lig 25
D10
B
501 10DECANE
lig 26
DD9
B
502 9NONANE
lig 27
GLY
B
503 5GLYCINE
lig 28
NAG
B
504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
HEX
B
505 6HEXANE
lig 30
HEX
B
506 6HEXANE
lig 31
NBU
B
507 4N-BUTANE
lig 32
D10
B
508 10DECANE
lig 33
NBU
B
509 4N-BUTANE
lig 34
NBU
B
510 4N-BUTANE
lig 35
HEX
B
511 6HEXANE
lig 36
GLY
C
501 5GLYCINE
lig 37
NAG
C
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
HP6
C
503 7HEPTANE
lig 39
HP6
C
504 7HEPTANE
lig 40
NBU
C
505 4N-BUTANE
lig 41
HEX
C
506 6HEXANE
lig 42
HEX
C
507 6HEXANE
lig 43
NBU
C
508 4N-BUTANE
lig 44
NBU
E
501 4N-BUTANE
lig 45
GLY
E
502 5GLYCINE
lig 46
NAG
E
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
D10
E
504 10DECANE
lig 48
UND
E
505 11UNDECANE
lig 49
OCT
E
506 8N-OCTANE
lig 50
OCT
E
507 8N-OCTANE
lig 51
HEX
E
508 6HEXANE
lig 52
HEX
E
509 6HEXANE