Analysis of Ligand-Protein Contacts in PDB entry:
8DNF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 8DNF. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACE
A
0 3ACETYL GROUP
lig 2
HIC
A
72 114-METHYL-HISTIDINE
lig 3
ACE
B
0 3ACETYL GROUP
lig 4
HIC
B
72 114-METHYL-HISTIDINE
lig 5
ACE
C
0 3ACETYL GROUP
lig 6
HIC
C
72 114-METHYL-HISTIDINE
lig 7
ACE
D
0 3ACETYL GROUP
lig 8
HIC
D
72 114-METHYL-HISTIDINE
lig 9
MG
A
400 1MAGNESIUM ION
lig 10
ADP
A
401 27ADENOSINE-5'-DIPHOSPHATE
lig 11
MG
B
400 1MAGNESIUM ION
lig 12
ADP
B
401 27ADENOSINE-5'-DIPHOSPHATE
lig 13
MG
C
400 1MAGNESIUM ION
lig 14
ADP
C
401 27ADENOSINE-5'-DIPHOSPHATE
lig 15
MG
D
400 1MAGNESIUM ION
lig 16
ADP
D
401 27ADENOSINE-5'-DIPHOSPHATE