Analysis of Ligand-Protein Contacts in PDB entry:
8DST


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 8DST. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
UQ4
A
1 17N-(7-NITRO-2,1,3-BENZOXADIAZOL-4-YL)-BETA-
lig 2
DPN
A
2 11D-PHENYLALANINE
lig 3
DPN
A
3 11D-PHENYLALANINE
lig 4
DSN
A
4 6D-SERINE
lig 5
DTY
A
5 12D-TYROSINE
lig 6
UQ4
B
1 17N-(7-NITRO-2,1,3-BENZOXADIAZOL-4-YL)-BETA-
lig 7
DPN
B
2 11D-PHENYLALANINE
lig 8
DPN
B
3 11D-PHENYLALANINE
lig 9
DSN
B
4 6D-SERINE
lig 10
DTY
B
5 12D-TYROSINE
lig 11
UQ4
C
1 17N-(7-NITRO-2,1,3-BENZOXADIAZOL-4-YL)-BETA-
lig 12
DPN
C
2 11D-PHENYLALANINE
lig 13
DPN
C
3 11D-PHENYLALANINE
lig 14
DSN
C
4 6D-SERINE
lig 15
DTY
C
5 12D-TYROSINE
lig 16
UQ4
D
1 17N-(7-NITRO-2,1,3-BENZOXADIAZOL-4-YL)-BETA-
lig 17
DPN
D
2 11D-PHENYLALANINE
lig 18
DPN
D
3 11D-PHENYLALANINE
lig 19
DSN
D
4 6D-SERINE
lig 20
DTY
D
5 12D-TYROSINE
lig 21
UQ4
E
1 17N-(7-NITRO-2,1,3-BENZOXADIAZOL-4-YL)-BETA-
lig 22
DPN
E
2 11D-PHENYLALANINE
lig 23
DPN
E
3 11D-PHENYLALANINE
lig 24
DSN
E
4 6D-SERINE
lig 25
DTY
E
5 12D-TYROSINE
lig 26
UQ4
F
1 17N-(7-NITRO-2,1,3-BENZOXADIAZOL-4-YL)-BETA-
lig 27
DPN
F
2 11D-PHENYLALANINE
lig 28
DPN
F
3 11D-PHENYLALANINE
lig 29
DSN
F
4 6D-SERINE
lig 30
DTY
F
5 12D-TYROSINE