Analysis of Ligand-Protein Contacts in PDB entry:
8DV3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 8DV3. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
FUC
C
6 10ALPHA-L-FUCOPYRANOSE
lig 7
FUC
C
7 10ALPHA-L-FUCOPYRANOSE
lig 8
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
FUC
D
3 10ALPHA-L-FUCOPYRANOSE
lig 11
EDO
A
1201 41,2-ETHANEDIOL
lig 12
CL
A
1202 1CHLORIDE ION
lig 13
NA
A
1203 1SODIUM ION
lig 14
EDO
A
1204 41,2-ETHANEDIOL
lig 15
6UL
A
1205 32TETRACOSYL PALMITATE
lig 16
IOD
A
1206 1IODIDE ION
lig 17
EDO
A
1207 41,2-ETHANEDIOL
lig 18
EDO
A
1208 41,2-ETHANEDIOL
lig 19
IOD
A
1209 1IODIDE ION
lig 20
EDO
A
1210 41,2-ETHANEDIOL
lig 21
EDO
A
1211 41,2-ETHANEDIOL
lig 22
PIE
A
1212 571-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOI
lig 23
CL
A
1213 1CHLORIDE ION
lig 24
CL
A
1214 1CHLORIDE ION
lig 25
CL
A
1215 1CHLORIDE ION
lig 26
NA
A
1216 1SODIUM ION
lig 27
CL
B
201 1CHLORIDE ION
lig 28
CL
B
202 1CHLORIDE ION