Analysis of Ligand-Protein Contacts in PDB entry:
8DVL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 8DVL. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OCS
A
1032 9CYSTEINESULFONIC ACID
lig 2
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
C
2 10ALPHA-L-FUCOPYRANOSE
lig 4
NAG
C
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
FUC
D
3 10ALPHA-L-FUCOPYRANOSE
lig 8
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 11
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
E
6 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
A
1301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
A
1302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
CA
A
1303 1CALCIUM ION
lig 17
CA
A
1304 1CALCIUM ION
lig 18
CA
A
1305 1CALCIUM ION
lig 19
EDO
A
1306 41,2-ETHANEDIOL
lig 20
EDO
A
1307 41,2-ETHANEDIOL
lig 21
EDO
A
1308 41,2-ETHANEDIOL
lig 22
EDO
A
1309 41,2-ETHANEDIOL
lig 23
EDO
A
1310 41,2-ETHANEDIOL
lig 24
EDO
A
1311 41,2-ETHANEDIOL
lig 25
EDO
A
1312 41,2-ETHANEDIOL