Analysis of Ligand-Protein Contacts in PDB entry:
8DVM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 34 ligands in PDB entry 8DVM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OCS
A
1032 9CYSTEINESULFONIC ACID
lig 2
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUC
F
4 10ALPHA-L-FUCOPYRANOSE
lig 6
FUC
F
5 10ALPHA-L-FUCOPYRANOSE
lig 7
FUC
F
6 10ALPHA-L-FUCOPYRANOSE
lig 8
FUC
F
7 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 16
NAG
A
1301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
CA
A
1302 1CALCIUM ION
lig 18
CA
A
1303 1CALCIUM ION
lig 19
CA
A
1304 1CALCIUM ION
lig 20
EDO
A
1305 41,2-ETHANEDIOL
lig 21
EDO
A
1306 41,2-ETHANEDIOL
lig 22
EDO
A
1307 41,2-ETHANEDIOL
lig 23
EDO
A
1308 41,2-ETHANEDIOL
lig 24
EDO
A
1309 41,2-ETHANEDIOL
lig 25
EDO
A
1310 41,2-ETHANEDIOL
lig 26
EDO
A
1311 41,2-ETHANEDIOL
lig 27
EDO
A
1312 41,2-ETHANEDIOL
lig 28
EDO
A
1313 41,2-ETHANEDIOL
lig 29
EDO
A
1314 41,2-ETHANEDIOL
lig 30
EDO
A
1315 41,2-ETHANEDIOL
lig 31
EDO
A
1316 41,2-ETHANEDIOL
lig 32
EDO
A
1317 41,2-ETHANEDIOL
lig 33
EDO
A
1318 41,2-ETHANEDIOL
lig 34
MES
A
1319 122-(N-MORPHOLINO)-ETHANESULFONIC ACID