Analysis of Ligand-Protein Contacts in PDB entry:
8ECD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 8ECD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ASP
A
401 9ASPARTIC ACID
lig 2
GOL
A
402 6GLYCEROL
lig 3
EDO
A
403 41,2-ETHANEDIOL
lig 4
EDO
A
404 41,2-ETHANEDIOL
lig 5
ASP
B
401 9ASPARTIC ACID
lig 6
GOL
B
402 6GLYCEROL
lig 7
GOL
B
403 6GLYCEROL
lig 8
EDO
B
404 41,2-ETHANEDIOL
lig 9
ASP
C
401 9ASPARTIC ACID
lig 10
GOL
C
402 6GLYCEROL
lig 11
EDO
C
403 41,2-ETHANEDIOL
lig 12
EDO
C
404 41,2-ETHANEDIOL
lig 13
EDO
C
405 41,2-ETHANEDIOL
lig 14
EDO
C
406 41,2-ETHANEDIOL
lig 15
EDO
C
407 41,2-ETHANEDIOL
lig 16
EDO
C
408 41,2-ETHANEDIOL
lig 17
CIT
C
409 13CITRIC ACID
lig 18
CIT
D
901 13CITRIC ACID
lig 19
ASP
D
902 9ASPARTIC ACID
lig 20
GOL
D
903 6GLYCEROL
lig 21
EDO
D
904 41,2-ETHANEDIOL
lig 22
EDO
D
905 41,2-ETHANEDIOL
lig 23
GOL
D
906 6GLYCEROL
lig 24
EDO
D
907 41,2-ETHANEDIOL
lig 25
GOL
D
908 6GLYCEROL