Analysis of Ligand-Protein Contacts in PDB entry:
8EF8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 8EF8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MPD
A
301 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 2
USU
A
302 35 PYRAZINO[1,2-A]PYRIMIDINE-1(6H)-CARBOXAMI
lig 3
MPD
B
301 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 4
USU
B
302 35 PYRAZINO[1,2-A]PYRIMIDINE-1(6H)-CARBOXAMI
lig 5
MPD
C
301 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 6
USU
C
302 35 PYRAZINO[1,2-A]PYRIMIDINE-1(6H)-CARBOXAMI
lig 7
MPD
D
301 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 8
USU
D
302 35 PYRAZINO[1,2-A]PYRIMIDINE-1(6H)-CARBOXAMI
lig 9
MPD
E
301 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 10
USU
E
302 35 PYRAZINO[1,2-A]PYRIMIDINE-1(6H)-CARBOXAMI
lig 11
MPD
F
301 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 12
USU
F
302 35 PYRAZINO[1,2-A]PYRIMIDINE-1(6H)-CARBOXAMI
lig 13
MPD
G
301 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 14
MPD
I
301 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 15
USU
I
302 35 PYRAZINO[1,2-A]PYRIMIDINE-1(6H)-CARBOXAMI
lig 16
MPD
K
301 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 17
USU
K
302 35 PYRAZINO[1,2-A]PYRIMIDINE-1(6H)-CARBOXAMI
lig 18
MPD
L
301 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 19
MPD
M
301 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 20
USU
M
302 35 PYRAZINO[1,2-A]PYRIMIDINE-1(6H)-CARBOXAMI
lig 21
MPD
N
301 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 22
USU
N
302 35 PYRAZINO[1,2-A]PYRIMIDINE-1(6H)-CARBOXAMI
lig 23
MPD
S
301 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 24
USU
S
302 35 PYRAZINO[1,2-A]PYRIMIDINE-1(6H)-CARBOXAMI
lig 25
MPD
T
301 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 26
USU
T
302 35 PYRAZINO[1,2-A]PYRIMIDINE-1(6H)-CARBOXAMI