Analysis of Ligand-Protein Contacts in PDB entry:
8EPK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 64 ligands in PDB entry 8EPK. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OMG
E
1 25O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 2
OMU
E
2 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 3
OMG
E
3 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 4
OMG
E
4 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 5
A2M
E
5 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 6
CFZ
E
6 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 7
UFT
E
7 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 8
A2M
E
8 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 9
UFT
E
9 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 10
A2M
E
10 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 11
CFZ
E
11 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 12
CFZ
E
12 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 13
OMG
E
13 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 14
CFZ
E
14 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 15
OMG
E
15 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 16
UFT
E
16 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 17
A2M
E
17 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 18
A2M
E
18 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 19
UFT
E
19 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 20
OMG
E
20 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 21
CFZ
E
21 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 22
OMU
E
22 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 23
OMC
E
24 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 24
CFZ
E
25 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 25
UFT
E
26 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 26
OMC
E
27 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 27
OMC
E
28 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 28
A2M
E
29 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 29
OMC
E
30 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 30
ATD
E
31 20THYMIDINE-3'-PHOSPHATE
lig 31
OMG
F
1 25O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 32
OMU
F
2 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 33
OMG
F
3 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 34
OMG
F
4 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 35
A2M
F
5 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 36
CFZ
F
6 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 37
UFT
F
7 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 38
A2M
F
8 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 39
UFT
F
9 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 40
A2M
F
10 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 41
CFZ
F
11 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 42
CFZ
F
12 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 43
OMG
F
13 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 44
CFZ
F
14 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 45
OMG
F
15 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 46
UFT
F
16 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 47
A2M
F
17 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 48
A2M
F
18 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 49
UFT
F
19 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 50
OMG
F
20 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 51
CFZ
F
21 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 52
OMU
F
22 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 53
OMC
F
24 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 54
CFZ
F
25 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 55
UFT
F
26 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 56
OMC
F
27 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 57
OMC
F
28 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 58
A2M
F
29 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 59
OMC
F
30 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 60
ATD
F
31 20THYMIDINE-3'-PHOSPHATE
lig 61
CA
B
301 1CALCIUM ION
lig 62
CA
D
301 1CALCIUM ION
lig 63
MG
E
101 1MAGNESIUM ION
lig 64
MG
F
101 1MAGNESIUM ION