Analysis of Ligand-Protein Contacts in PDB entry:
8EQM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 132 ligands in PDB entry 8EQM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OEX
A
401 5CA-MN4-O5 CLUSTER
lig 2
FE2
A
402 1FE (II) ION
lig 3
CL
A
403 1CHLORIDE ION
lig 4
CLA
A
404 65CHLOROPHYLL A
lig 5
CLA
A
405 50CHLOROPHYLL A
lig 6
PHO
A
406 64PHEOPHYTIN A
lig 7
CLA
A
407 50CHLOROPHYLL A
lig 8
BCR
A
408 40BETA-CAROTENE
lig 9
SQD
A
409 52 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 10
PL9
A
410 20 BENZOQUINONE
lig 11
BCT
A
411 4BICARBONATE ION
lig 12
LHG
A
412 371,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 13
CLA
B
601 45CHLOROPHYLL A
lig 14
CLA
B
602 65CHLOROPHYLL A
lig 15
CLA
B
603 55CHLOROPHYLL A
lig 16
F6C
B
604 66CHLOROPHYLL F
lig 17
CLA
B
605 65CHLOROPHYLL A
lig 18
CLA
B
606 55CHLOROPHYLL A
lig 19
F6C
B
607 61CHLOROPHYLL F
lig 20
CLA
B
608 55CHLOROPHYLL A
lig 21
CLA
B
609 45CHLOROPHYLL A
lig 22
CLA
B
610 65CHLOROPHYLL A
lig 23
CLA
B
611 65CHLOROPHYLL A
lig 24
CLA
B
612 65CHLOROPHYLL A
lig 25
F6C
B
613 66CHLOROPHYLL F
lig 26
CLA
B
614 55CHLOROPHYLL A
lig 27
CLA
B
615 60CHLOROPHYLL A
lig 28
BCR
B
616 40BETA-CAROTENE
lig 29
BCR
B
617 40BETA-CAROTENE
lig 30
BCR
B
618 40BETA-CAROTENE
lig 31
CL
C
501 1CHLORIDE ION
lig 32
CLA
C
502 60CHLOROPHYLL A
lig 33
CLA
C
503 65CHLOROPHYLL A
lig 34
CLA
C
504 65CHLOROPHYLL A
lig 35
CLA
C
505 50CHLOROPHYLL A
lig 36
CLA
C
506 60CHLOROPHYLL A
lig 37
CLA
C
507 55CHLOROPHYLL A
lig 38
F6C
C
508 61CHLOROPHYLL F
lig 39
CLA
C
509 60CHLOROPHYLL A
lig 40
CLA
C
510 65CHLOROPHYLL A
lig 41
CLA
C
511 65CHLOROPHYLL A
lig 42
CLA
C
512 50CHLOROPHYLL A
lig 43
CLA
C
513 45CHLOROPHYLL A
lig 44
CLA
C
514 45CHLOROPHYLL A
lig 45
BCR
C
515 40BETA-CAROTENE
lig 46
DGD
C
516 49DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 47
DGD
C
517 34DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 48
BCR
C
518 20BETA-CAROTENE
lig 49
CL7
D
401 65CHLOROPHYLL D
lig 50
PHO
D
402 64PHEOPHYTIN A
lig 51
CLA
D
403 60CHLOROPHYLL A
lig 52
CLA
D
404 45CHLOROPHYLL A
lig 53
BCR
D
405 26BETA-CAROTENE
lig 54
PL9
D
406 45 BENZOQUINONE
lig 55
LHG
D
407 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 56
LHG
D
408 471,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 57
LMG
D
409 331,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 58
DGD
D
410 45DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 59
HEM
E
101 43PROTOPORPHYRIN IX CONTAINING FE
lig 60
CLA
H
101 50CHLOROPHYLL A
lig 61
RRX
H
102 41(3R)-BETA,BETA-CAROTEN-3-OL
lig 62
LHG
L
101 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 63
SQD
L
102 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 64
LMG
M
101 401,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 65
LMT
M
102 35DODECYL-BETA-D-MALTOSIDE
lig 66
HEM
V
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 67
OEX
a
401 5CA-MN4-O5 CLUSTER
lig 68
FE2
a
402 1FE (II) ION
lig 69
CL
a
403 1CHLORIDE ION
lig 70
CLA
a
404 65CHLOROPHYLL A
lig 71
CLA
a
405 50CHLOROPHYLL A
lig 72
PHO
a
406 64PHEOPHYTIN A
lig 73
CLA
a
407 50CHLOROPHYLL A
lig 74
BCR
a
408 40BETA-CAROTENE
lig 75
SQD
a
409 52 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 76
PL9
a
410 20 BENZOQUINONE
lig 77
BCT
a
411 4BICARBONATE ION
lig 78
LHG
a
412 371,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 79
CLA
b
601 45CHLOROPHYLL A
lig 80
CLA
b
602 65CHLOROPHYLL A
lig 81
CLA
b
603 55CHLOROPHYLL A
lig 82
F6C
b
604 66CHLOROPHYLL F
lig 83
CLA
b
605 65CHLOROPHYLL A
lig 84
CLA
b
606 55CHLOROPHYLL A
lig 85
F6C
b
607 61CHLOROPHYLL F
lig 86
CLA
b
608 55CHLOROPHYLL A
lig 87
CLA
b
609 45CHLOROPHYLL A
lig 88
CLA
b
610 65CHLOROPHYLL A
lig 89
CLA
b
611 65CHLOROPHYLL A
lig 90
CLA
b
612 65CHLOROPHYLL A
lig 91
F6C
b
613 66CHLOROPHYLL F
lig 92
CLA
b
614 55CHLOROPHYLL A
lig 93
CLA
b
615 60CHLOROPHYLL A
lig 94
BCR
b
616 40BETA-CAROTENE
lig 95
BCR
b
617 40BETA-CAROTENE
lig 96
BCR
b
618 40BETA-CAROTENE
lig 97
CL
c
501 1CHLORIDE ION
lig 98
CLA
c
502 60CHLOROPHYLL A
lig 99
CLA
c
503 65CHLOROPHYLL A
lig 100
CLA
c
504 65CHLOROPHYLL A
lig 101
CLA
c
505 50CHLOROPHYLL A
lig 102
CLA
c
506 60CHLOROPHYLL A
lig 103
CLA
c
507 55CHLOROPHYLL A
lig 104
F6C
c
508 61CHLOROPHYLL F
lig 105
CLA
c
509 60CHLOROPHYLL A
lig 106
CLA
c
510 65CHLOROPHYLL A
lig 107
CLA
c
511 65CHLOROPHYLL A
lig 108
CLA
c
512 50CHLOROPHYLL A
lig 109
CLA
c
513 45CHLOROPHYLL A
lig 110
CLA
c
514 45CHLOROPHYLL A
lig 111
BCR
c
515 40BETA-CAROTENE
lig 112
DGD
c
516 49DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 113
DGD
c
517 34DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 114
BCR
c
518 20BETA-CAROTENE
lig 115
CL7
d
401 65CHLOROPHYLL D
lig 116
PHO
d
402 64PHEOPHYTIN A
lig 117
CLA
d
403 60CHLOROPHYLL A
lig 118
CLA
d
404 45CHLOROPHYLL A
lig 119
BCR
d
405 26BETA-CAROTENE
lig 120
PL9
d
406 45 BENZOQUINONE
lig 121
LHG
d
407 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 122
LHG
d
408 471,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 123
LMG
d
409 331,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 124
DGD
d
410 45DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 125
HEM
e
101 43PROTOPORPHYRIN IX CONTAINING FE
lig 126
CLA
h
101 50CHLOROPHYLL A
lig 127
RRX
h
102 41(3R)-BETA,BETA-CAROTEN-3-OL
lig 128
LHG
l
101 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 129
SQD
l
102 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 130
LMG
m
101 401,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 131
LMT
m
102 35DODECYL-BETA-D-MALTOSIDE
lig 132
HEM
v
201 43PROTOPORPHYRIN IX CONTAINING FE