Analysis of Ligand-Protein Contacts in PDB entry:
8F13


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 8F13. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DAS
B
1 8D-ASPARTIC ACID
lig 2
DPR
B
2 7D-PROLINE
lig 3
DAL
B
3 5D-ALANINE
lig 4
DTR
B
4 14D-TRYPTOPHAN
lig 5
DTY
B
5 12D-TYROSINE
lig 6
DGL
B
6 9D-GLUTAMIC ACID
lig 7
DCY
B
7 6D-CYSTEINE
lig 8
DNE
B
8 8D-NORLEUCINE
lig 9
DGL
B
9 9D-GLUTAMIC ACID
lig 10
DAL
B
10 5D-ALANINE
lig 11
DAL
B
11 5D-ALANINE
lig 12
DNE
B
12 8D-NORLEUCINE
lig 13
DNE
B
13 8D-NORLEUCINE
lig 14
DCY
B
14 6D-CYSTEINE
lig 15
DGN
B
15 9D-GLUTAMINE
lig 16
DGN
B
16 9D-GLUTAMINE
lig 17
DVA
B
17 7D-VALINE
lig 18
EDO
A
201 41,2-ETHANEDIOL
lig 19
EDO
A
202 41,2-ETHANEDIOL
lig 20
EDO
A
203 41,2-ETHANEDIOL
lig 21
EDO
A
204 41,2-ETHANEDIOL
lig 22
SO4
A
205 5SULFATE ION
lig 23
DMS
A
206 4DIMETHYL SULFOXIDE
lig 24
WHL
B
101 14N,N'-(1,4-PHENYLENE)DIACETAMIDE
lig 25
EDO
B
102 41,2-ETHANEDIOL
lig 26
EDO
B
103 41,2-ETHANEDIOL