Analysis of Ligand-Protein Contacts in PDB entry:
8F4F

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 192 ligands in PDB entry 8F4F. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	FME	I	1	10	N-FORMYLMETHIONINE
lig 2	FME	M	1	10	N-FORMYLMETHIONINE
lig 3	FME	T	1	10	N-FORMYLMETHIONINE
lig 4	FME	i	1	10	N-FORMYLMETHIONINE
lig 5	FME	m	1	10	N-FORMYLMETHIONINE
lig 6	FME	t	1	10	N-FORMYLMETHIONINE
lig 7	OEY	A	601	11	CA-MN4-O6 CLUSTER
lig 8	FE2	A	602	1	FE (II) ION
lig 9	CL	A	603	1	CHLORIDE ION
lig 10	CL	A	604	1	CHLORIDE ION
lig 11	BCT	A	605	4	BICARBONATE ION
lig 12	CLA	A	606	65	CHLOROPHYLL A
lig 13	CLA	A	607	65	CHLOROPHYLL A
lig 14	CLA	A	608	54	CHLOROPHYLL A
lig 15	BCR	A	609	40	BETA-CAROTENE
lig 16	PL9	A	610	55	BENZOQUINONE
lig 17	CLA	A	611	65	CHLOROPHYLL A
lig 18	LMG	A	612	48	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 19	SQD	A	613	52	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 20	LHG	A	614	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 21	SQD	A	615	39	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 22	DGD	A	616	66	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 23	STE	A	617	20	STEARIC ACID
lig 24	CLA	B	601	65	CHLOROPHYLL A
lig 25	CLA	B	602	65	CHLOROPHYLL A
lig 26	CLA	B	603	65	CHLOROPHYLL A
lig 27	CLA	B	604	65	CHLOROPHYLL A
lig 28	CLA	B	605	65	CHLOROPHYLL A
lig 29	CLA	B	606	65	CHLOROPHYLL A
lig 30	CLA	B	607	65	CHLOROPHYLL A
lig 31	CLA	B	608	65	CHLOROPHYLL A
lig 32	CLA	B	609	65	CHLOROPHYLL A
lig 33	CLA	B	610	65	CHLOROPHYLL A
lig 34	CLA	B	611	65	CHLOROPHYLL A
lig 35	CLA	B	612	65	CHLOROPHYLL A
lig 36	CLA	B	613	65	CHLOROPHYLL A
lig 37	CLA	B	614	65	CHLOROPHYLL A
lig 38	CLA	B	615	65	CHLOROPHYLL A
lig 39	CLA	B	616	60	CHLOROPHYLL A
lig 40	BCR	B	617	40	BETA-CAROTENE
lig 41	BCR	B	618	40	BETA-CAROTENE
lig 42	BCR	B	619	40	BETA-CAROTENE
lig 43	LMG	B	620	51	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 44	STE	B	621	17	STEARIC ACID
lig 45	LMG	B	622	28	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 46	SQD	B	623	54	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 47	STE	B	624	12	STEARIC ACID
lig 48	STE	B	625	18	STEARIC ACID
lig 49	STE	B	626	12	STEARIC ACID
lig 50	STE	B	627	16	STEARIC ACID
lig 51	CLA	C	501	65	CHLOROPHYLL A
lig 52	CLA	C	502	65	CHLOROPHYLL A
lig 53	CLA	C	503	65	CHLOROPHYLL A
lig 54	CLA	C	504	59	CHLOROPHYLL A
lig 55	CLA	C	505	65	CHLOROPHYLL A
lig 56	CLA	C	506	65	CHLOROPHYLL A
lig 57	CLA	C	507	65	CHLOROPHYLL A
lig 58	CLA	C	508	65	CHLOROPHYLL A
lig 59	CLA	C	509	65	CHLOROPHYLL A
lig 60	CLA	C	510	65	CHLOROPHYLL A
lig 61	CLA	C	511	65	CHLOROPHYLL A
lig 62	CLA	C	512	65	CHLOROPHYLL A
lig 63	CLA	C	513	65	CHLOROPHYLL A
lig 64	BCR	C	514	40	BETA-CAROTENE
lig 65	DGD	C	515	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 66	DGD	C	516	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 67	LMG	C	517	48	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 68	STE	C	518	12	STEARIC ACID
lig 69	STE	C	519	12	STEARIC ACID
lig 70	STE	C	520	16	STEARIC ACID
lig 71	PHO	D	401	64	PHEOPHYTIN A
lig 72	PHO	D	402	64	PHEOPHYTIN A
lig 73	CLA	D	403	65	CHLOROPHYLL A
lig 74	CLA	D	404	65	CHLOROPHYLL A
lig 75	BCR	D	405	40	BETA-CAROTENE
lig 76	PL9	D	406	55	BENZOQUINONE
lig 77	LMG	D	407	51	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 78	SQD	D	408	36	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 79	LHG	D	409	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 80	LHG	D	410	47	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 81	LMG	D	411	33	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 82	LHG	D	412	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 83	STE	D	413	20	STEARIC ACID
lig 84	HEM	E	101	43	PROTOPORPHYRIN IX CONTAINING FE
lig 85	STE	E	102	12	STEARIC ACID
lig 86	BCR	H	101	40	BETA-CAROTENE
lig 87	DGD	H	102	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 88	STE	H	103	18	STEARIC ACID
lig 89	STE	I	101	15	STEARIC ACID
lig 90	DGD	J	101	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 91	STE	J	102	12	STEARIC ACID
lig 92	BCR	K	101	40	BETA-CAROTENE
lig 93	BCR	K	102	40	BETA-CAROTENE
lig 94	BCR	K	103	40	BETA-CAROTENE
lig 95	LHG	L	101	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 96	STE	L	102	12	STEARIC ACID
lig 97	STE	M	101	15	STEARIC ACID
lig 98	STE	M	102	10	STEARIC ACID
lig 99	BCR	T	101	40	BETA-CAROTENE
lig 100	STE	T	102	16	STEARIC ACID
lig 101	HEC	V	201	43	HEME C
lig 102	OEY	a	601	11	CA-MN4-O6 CLUSTER
lig 103	FE2	a	602	1	FE (II) ION
lig 104	CL	a	603	1	CHLORIDE ION
lig 105	CL	a	604	1	CHLORIDE ION
lig 106	CLA	a	605	65	CHLOROPHYLL A
lig 107	CLA	a	606	65	CHLOROPHYLL A
lig 108	PHO	a	607	64	PHEOPHYTIN A
lig 109	CLA	a	608	65	CHLOROPHYLL A
lig 110	BCR	a	609	40	BETA-CAROTENE
lig 111	PL9	a	610	55	BENZOQUINONE
lig 112	CLA	a	611	65	CHLOROPHYLL A
lig 113	SQD	a	612	54	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 114	SQD	a	613	36	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 115	DGD	a	614	44	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 116	STE	a	615	12	STEARIC ACID
lig 117	CLA	b	601	65	CHLOROPHYLL A
lig 118	CLA	b	602	65	CHLOROPHYLL A
lig 119	CLA	b	603	65	CHLOROPHYLL A
lig 120	CLA	b	604	65	CHLOROPHYLL A
lig 121	CLA	b	605	65	CHLOROPHYLL A
lig 122	CLA	b	606	65	CHLOROPHYLL A
lig 123	CLA	b	607	65	CHLOROPHYLL A
lig 124	CLA	b	608	65	CHLOROPHYLL A
lig 125	CLA	b	609	65	CHLOROPHYLL A
lig 126	CLA	b	610	65	CHLOROPHYLL A
lig 127	CLA	b	611	65	CHLOROPHYLL A
lig 128	CLA	b	612	65	CHLOROPHYLL A
lig 129	CLA	b	613	65	CHLOROPHYLL A
lig 130	CLA	b	614	65	CHLOROPHYLL A
lig 131	CLA	b	615	65	CHLOROPHYLL A
lig 132	CLA	b	616	60	CHLOROPHYLL A
lig 133	BCR	b	617	40	BETA-CAROTENE
lig 134	BCR	b	618	40	BETA-CAROTENE
lig 135	BCR	b	619	40	BETA-CAROTENE
lig 136	SQD	b	620	49	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 137	STE	b	621	20	STEARIC ACID
lig 138	LMG	b	622	55	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 139	STE	b	623	16	STEARIC ACID
lig 140	STE	b	624	15	STEARIC ACID
lig 141	STE	b	625	10	STEARIC ACID
lig 142	CLA	c	501	65	CHLOROPHYLL A
lig 143	CLA	c	502	65	CHLOROPHYLL A
lig 144	CLA	c	503	65	CHLOROPHYLL A
lig 145	CLA	c	504	60	CHLOROPHYLL A
lig 146	CLA	c	505	65	CHLOROPHYLL A
lig 147	CLA	c	506	65	CHLOROPHYLL A
lig 148	CLA	c	507	65	CHLOROPHYLL A
lig 149	CLA	c	508	64	CHLOROPHYLL A
lig 150	CLA	c	509	65	CHLOROPHYLL A
lig 151	CLA	c	510	65	CHLOROPHYLL A
lig 152	CLA	c	511	65	CHLOROPHYLL A
lig 153	CLA	c	512	65	CHLOROPHYLL A
lig 154	CLA	c	513	65	CHLOROPHYLL A
lig 155	BCR	c	514	40	BETA-CAROTENE
lig 156	DGD	c	515	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 157	DGD	c	516	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 158	DGD	c	517	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 159	LMG	c	518	37	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 160	STE	c	519	20	STEARIC ACID
lig 161	LMG	c	520	48	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 162	LMG	c	521	49	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 163	BCT	d	401	4	BICARBONATE ION
lig 164	PHO	d	402	64	PHEOPHYTIN A
lig 165	CLA	d	403	65	CHLOROPHYLL A
lig 166	CLA	d	404	65	CHLOROPHYLL A
lig 167	BCR	d	405	40	BETA-CAROTENE
lig 168	PL9	d	406	55	BENZOQUINONE
lig 169	LHG	d	407	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 170	LHG	d	408	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 171	LHG	d	409	39	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 172	LMG	d	410	23	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 173	LMG	d	411	44	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 174	STE	d	412	17	STEARIC ACID
lig 175	STE	d	413	20	STEARIC ACID
lig 176	LHG	e	101	42	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 177	HEM	f	101	43	PROTOPORPHYRIN IX CONTAINING FE
lig 178	SQD	f	102	41	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 179	BCR	h	101	40	BETA-CAROTENE
lig 180	DGD	h	102	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 181	STE	j	101	12	STEARIC ACID
lig 182	BCR	k	101	40	BETA-CAROTENE
lig 183	BCR	k	102	40	BETA-CAROTENE
lig 184	BCR	k	103	40	BETA-CAROTENE
lig 185	STE	k	104	12	STEARIC ACID
lig 186	LHG	l	101	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 187	LMG	m	101	51	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 188	STE	m	102	18	STEARIC ACID
lig 189	BCR	t	101	40	BETA-CAROTENE
lig 190	STE	t	102	14	STEARIC ACID
lig 191	STE	t	103	10	STEARIC ACID
lig 192	HEC	v	201	43	HEME C

Analysis of Ligand-Protein Contacts in PDB entry: 8F4F

Analysis of Ligand-Protein Contacts in PDB entry:
8F4F