Analysis of Ligand-Protein Contacts in PDB entry:
8F4H

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 192 ligands in PDB entry 8F4H. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	FME	I	1	10	N-FORMYLMETHIONINE
lig 2	FME	M	1	10	N-FORMYLMETHIONINE
lig 3	FME	T	1	10	N-FORMYLMETHIONINE
lig 4	FME	i	1	10	N-FORMYLMETHIONINE
lig 5	FME	m	1	10	N-FORMYLMETHIONINE
lig 6	FME	t	1	10	N-FORMYLMETHIONINE
lig 7	OEY	A	601	11	CA-MN4-O6 CLUSTER
lig 8	FE2	A	603	1	FE (II) ION
lig 9	CL	A	604	1	CHLORIDE ION
lig 10	CL	A	605	1	CHLORIDE ION
lig 11	BCT	A	606	4	BICARBONATE ION
lig 12	CLA	A	607	65	CHLOROPHYLL A
lig 13	CLA	A	608	65	CHLOROPHYLL A
lig 14	PHO	A	609	64	PHEOPHYTIN A
lig 15	CLA	A	610	54	CHLOROPHYLL A
lig 16	BCR	A	611	40	BETA-CAROTENE
lig 17	PL9	A	612	55	BENZOQUINONE
lig 18	CLA	A	613	65	CHLOROPHYLL A
lig 19	LMG	A	614	48	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 20	LHG	A	615	47	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 21	SQD	A	616	52	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 22	LHG	A	617	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 23	SQD	A	618	39	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 24	DGD	A	619	66	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 25	CLA	B	601	65	CHLOROPHYLL A
lig 26	CLA	B	602	65	CHLOROPHYLL A
lig 27	CLA	B	603	65	CHLOROPHYLL A
lig 28	CLA	B	604	65	CHLOROPHYLL A
lig 29	CLA	B	605	65	CHLOROPHYLL A
lig 30	CLA	B	606	65	CHLOROPHYLL A
lig 31	CLA	B	607	65	CHLOROPHYLL A
lig 32	CLA	B	608	65	CHLOROPHYLL A
lig 33	CLA	B	609	65	CHLOROPHYLL A
lig 34	CLA	B	610	65	CHLOROPHYLL A
lig 35	CLA	B	611	65	CHLOROPHYLL A
lig 36	CLA	B	612	65	CHLOROPHYLL A
lig 37	CLA	B	613	65	CHLOROPHYLL A
lig 38	CLA	B	614	65	CHLOROPHYLL A
lig 39	CLA	B	615	65	CHLOROPHYLL A
lig 40	CLA	B	616	60	CHLOROPHYLL A
lig 41	BCR	B	617	40	BETA-CAROTENE
lig 42	BCR	B	618	40	BETA-CAROTENE
lig 43	BCR	B	619	40	BETA-CAROTENE
lig 44	STE	B	620	17	STEARIC ACID
lig 45	LMG	B	621	28	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 46	SQD	B	622	54	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 47	STE	B	623	12	STEARIC ACID
lig 48	STE	B	624	12	STEARIC ACID
lig 49	STE	B	625	16	STEARIC ACID
lig 50	CLA	C	501	65	CHLOROPHYLL A
lig 51	CLA	C	502	65	CHLOROPHYLL A
lig 52	CLA	C	503	65	CHLOROPHYLL A
lig 53	CLA	C	504	59	CHLOROPHYLL A
lig 54	CLA	C	505	65	CHLOROPHYLL A
lig 55	CLA	C	506	65	CHLOROPHYLL A
lig 56	CLA	C	507	65	CHLOROPHYLL A
lig 57	CLA	C	508	65	CHLOROPHYLL A
lig 58	CLA	C	509	65	CHLOROPHYLL A
lig 59	CLA	C	510	65	CHLOROPHYLL A
lig 60	CLA	C	511	65	CHLOROPHYLL A
lig 61	CLA	C	512	65	CHLOROPHYLL A
lig 62	CLA	C	513	65	CHLOROPHYLL A
lig 63	BCR	C	514	40	BETA-CAROTENE
lig 64	DGD	C	515	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 65	DGD	C	516	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 66	DGD	C	517	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 67	LMG	C	518	48	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 68	STE	C	519	12	STEARIC ACID
lig 69	STE	C	520	12	STEARIC ACID
lig 70	STE	C	521	16	STEARIC ACID
lig 71	PHO	D	401	64	PHEOPHYTIN A
lig 72	CLA	D	402	65	CHLOROPHYLL A
lig 73	CLA	D	403	65	CHLOROPHYLL A
lig 74	BCR	D	404	40	BETA-CAROTENE
lig 75	PL9	D	405	55	BENZOQUINONE
lig 76	LMG	D	406	51	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 77	LHG	D	407	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 78	LMG	D	408	33	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 79	LHG	D	409	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 80	HEM	F	101	43	PROTOPORPHYRIN IX CONTAINING FE
lig 81	SQD	F	102	36	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 82	STE	F	103	12	STEARIC ACID
lig 83	DGD	H	101	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 84	STE	H	102	18	STEARIC ACID
lig 85	STE	I	101	15	STEARIC ACID
lig 86	STE	J	101	12	STEARIC ACID
lig 87	BCR	K	101	40	BETA-CAROTENE
lig 88	BCR	K	102	40	BETA-CAROTENE
lig 89	LHG	L	101	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 90	STE	L	102	12	STEARIC ACID
lig 91	LMG	M	101	51	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 92	STE	M	102	15	STEARIC ACID
lig 93	STE	M	103	10	STEARIC ACID
lig 94	BCR	T	101	40	BETA-CAROTENE
lig 95	STE	T	102	16	STEARIC ACID
lig 96	STE	T	103	15	STEARIC ACID
lig 97	HEC	V	201	43	HEME C
lig 98	BCR	X	101	40	BETA-CAROTENE
lig 99	STE	X	102	20	STEARIC ACID
lig 100	BCR	Z	101	40	BETA-CAROTENE
lig 101	OEY	a	601	11	CA-MN4-O6 CLUSTER
lig 102	FE2	a	603	1	FE (II) ION
lig 103	CL	a	604	1	CHLORIDE ION
lig 104	CL	a	605	1	CHLORIDE ION
lig 105	CLA	a	606	65	CHLOROPHYLL A
lig 106	CLA	a	607	65	CHLOROPHYLL A
lig 107	PHO	a	608	64	PHEOPHYTIN A
lig 108	CLA	a	609	65	CHLOROPHYLL A
lig 109	BCR	a	610	40	BETA-CAROTENE
lig 110	PL9	a	611	55	BENZOQUINONE
lig 111	CLA	a	612	65	CHLOROPHYLL A
lig 112	SQD	a	613	54	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 113	DGD	a	614	44	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 114	STE	a	615	12	STEARIC ACID
lig 115	CLA	b	601	65	CHLOROPHYLL A
lig 116	CLA	b	602	65	CHLOROPHYLL A
lig 117	CLA	b	603	65	CHLOROPHYLL A
lig 118	CLA	b	604	65	CHLOROPHYLL A
lig 119	CLA	b	605	65	CHLOROPHYLL A
lig 120	CLA	b	606	65	CHLOROPHYLL A
lig 121	CLA	b	607	65	CHLOROPHYLL A
lig 122	CLA	b	608	65	CHLOROPHYLL A
lig 123	CLA	b	609	65	CHLOROPHYLL A
lig 124	CLA	b	610	65	CHLOROPHYLL A
lig 125	CLA	b	611	65	CHLOROPHYLL A
lig 126	CLA	b	612	65	CHLOROPHYLL A
lig 127	CLA	b	613	65	CHLOROPHYLL A
lig 128	CLA	b	614	65	CHLOROPHYLL A
lig 129	CLA	b	615	60	CHLOROPHYLL A
lig 130	BCR	b	616	40	BETA-CAROTENE
lig 131	BCR	b	617	40	BETA-CAROTENE
lig 132	BCR	b	618	40	BETA-CAROTENE
lig 133	SQD	b	619	49	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 134	STE	b	620	20	STEARIC ACID
lig 135	LMG	b	621	55	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 136	STE	b	622	20	STEARIC ACID
lig 137	STE	b	623	10	STEARIC ACID
lig 138	CLA	c	501	65	CHLOROPHYLL A
lig 139	CLA	c	502	65	CHLOROPHYLL A
lig 140	CLA	c	503	65	CHLOROPHYLL A
lig 141	CLA	c	504	60	CHLOROPHYLL A
lig 142	CLA	c	505	65	CHLOROPHYLL A
lig 143	CLA	c	506	65	CHLOROPHYLL A
lig 144	CLA	c	507	65	CHLOROPHYLL A
lig 145	CLA	c	508	64	CHLOROPHYLL A
lig 146	CLA	c	509	65	CHLOROPHYLL A
lig 147	CLA	c	510	65	CHLOROPHYLL A
lig 148	CLA	c	511	65	CHLOROPHYLL A
lig 149	CLA	c	512	65	CHLOROPHYLL A
lig 150	CLA	c	513	65	CHLOROPHYLL A
lig 151	BCR	c	514	40	BETA-CAROTENE
lig 152	BCR	c	515	40	BETA-CAROTENE
lig 153	BCR	c	516	40	BETA-CAROTENE
lig 154	DGD	c	517	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 155	DGD	c	518	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 156	DGD	c	519	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 157	LMG	c	520	37	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 158	STE	c	521	20	STEARIC ACID
lig 159	LMG	c	522	48	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 160	LMG	c	523	49	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 161	BCT	d	401	4	BICARBONATE ION
lig 162	PHO	d	402	64	PHEOPHYTIN A
lig 163	CLA	d	403	65	CHLOROPHYLL A
lig 164	CLA	d	404	65	CHLOROPHYLL A
lig 165	BCR	d	405	40	BETA-CAROTENE
lig 166	PL9	d	406	55	BENZOQUINONE
lig 167	LHG	d	407	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 168	LHG	d	408	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 169	LHG	d	409	39	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 170	LMG	d	410	23	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 171	LMG	d	411	44	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 172	STE	d	412	16	STEARIC ACID
lig 173	STE	d	413	17	STEARIC ACID
lig 174	STE	d	414	20	STEARIC ACID
lig 175	HEM	e	101	43	PROTOPORPHYRIN IX CONTAINING FE
lig 176	LHG	e	102	42	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 177	SQD	f	101	41	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 178	CLA	h	101	65	CHLOROPHYLL A
lig 179	BCR	h	102	40	BETA-CAROTENE
lig 180	DGD	h	103	62	DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 181	STE	j	101	12	STEARIC ACID
lig 182	BCR	k	101	40	BETA-CAROTENE
lig 183	STE	k	102	12	STEARIC ACID
lig 184	LHG	l	101	49	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 185	STE	l	102	18	STEARIC ACID
lig 186	LMG	m	101	51	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 187	BCR	t	101	40	BETA-CAROTENE
lig 188	SQD	t	102	36	GLUCOPYRANOSYL]-SN-GLYCEROL
lig 189	STE	t	103	14	STEARIC ACID
lig 190	STE	t	104	10	STEARIC ACID
lig 191	STE	t	105	18	STEARIC ACID
lig 192	HEC	v	201	43	HEME C

Analysis of Ligand-Protein Contacts in PDB entry: 8F4H

Analysis of Ligand-Protein Contacts in PDB entry:
8F4H