Analysis of Ligand-Protein Contacts in PDB entry:
8F6Y


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 36 ligands in PDB entry 8F6Y. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 11
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 14
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
I
5 11ALPHA-D-MANNOPYRANOSE
lig 16
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 19
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 20
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 21
V8D
A
601 18ETOMIDATE
lig 22
CHT
A
602 7CHOLINE ION
lig 23
CLR
A
603 28CHOLESTEROL
lig 24
NAG
B
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
POV
B
602 37 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 26
POV
C
501 35 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 27
POV
C
502 32 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 28
CLR
C
503 28CHOLESTEROL
lig 29
V8D
D
601 18ETOMIDATE
lig 30
CHT
D
602 7CHOLINE ION
lig 31
CLR
D
603 28CHOLESTEROL
lig 32
POV
D
604 35 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 33
DD9
D
605 9NONANE
lig 34
NAG
E
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
POV
E
502 38 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 36
POV
E
503 35 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL