Analysis of Ligand-Protein Contacts in PDB entry:
8G3M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 97 ligands in PDB entry 8G3M. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
q
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
r
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
r
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
r
3 11BETA-D-MANNOPYRANOSE
lig 7
MAN
r
4 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
s
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
s
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
s
3 11BETA-D-MANNOPYRANOSE
lig 11
MAN
s
4 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
s
5 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
s
6 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
s
7 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
s
8 11ALPHA-D-MANNOPYRANOSE
lig 16
NAG
t
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
t
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
BMA
t
3 11BETA-D-MANNOPYRANOSE
lig 19
FUC
t
4 10ALPHA-L-FUCOPYRANOSE
lig 20
NAG
v
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
v
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
w
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
w
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 27
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 30
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 31
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
BMA
S
3 11BETA-D-MANNOPYRANOSE
lig 34
MAN
S
4 11ALPHA-D-MANNOPYRANOSE
lig 35
MAN
S
5 11ALPHA-D-MANNOPYRANOSE
lig 36
MAN
S
6 11ALPHA-D-MANNOPYRANOSE
lig 37
MAN
S
7 11ALPHA-D-MANNOPYRANOSE
lig 38
MAN
S
8 11ALPHA-D-MANNOPYRANOSE
lig 39
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 42
FUC
V
4 10ALPHA-L-FUCOPYRANOSE
lig 43
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 50
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
BMA
Q
3 11BETA-D-MANNOPYRANOSE
lig 53
MAN
Q
4 11ALPHA-D-MANNOPYRANOSE
lig 54
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
BMA
T
3 11BETA-D-MANNOPYRANOSE
lig 57
MAN
T
4 11ALPHA-D-MANNOPYRANOSE
lig 58
MAN
T
5 11ALPHA-D-MANNOPYRANOSE
lig 59
MAN
T
6 11ALPHA-D-MANNOPYRANOSE
lig 60
MAN
T
7 11ALPHA-D-MANNOPYRANOSE
lig 61
MAN
T
8 11ALPHA-D-MANNOPYRANOSE
lig 62
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
BMA
W
3 11BETA-D-MANNOPYRANOSE
lig 65
FUC
W
4 10ALPHA-L-FUCOPYRANOSE
lig 66
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 67
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 73
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 74
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 75
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 76
MAN
R
4 11ALPHA-D-MANNOPYRANOSE
lig 77
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 78
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 79
BMA
U
3 11BETA-D-MANNOPYRANOSE
lig 80
MAN
U
4 11ALPHA-D-MANNOPYRANOSE
lig 81
MAN
U
5 11ALPHA-D-MANNOPYRANOSE
lig 82
MAN
U
6 11ALPHA-D-MANNOPYRANOSE
lig 83
MAN
U
7 11ALPHA-D-MANNOPYRANOSE
lig 84
MAN
U
8 11ALPHA-D-MANNOPYRANOSE
lig 85
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 86
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 87
BMA
X
3 11BETA-D-MANNOPYRANOSE
lig 88
FUC
X
4 10ALPHA-L-FUCOPYRANOSE
lig 89
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 90
NAG
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 91
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 92
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 93
CA
G
2000 1CALCIUM ION
lig 94
CA
J
2000 1CALCIUM ION
lig 95
CA
K
2000 1CALCIUM ION
lig 96
CA
L
501 1CALCIUM ION
lig 97
CA
L
502 1CALCIUM ION