Analysis of Ligand-Protein Contacts in PDB entry:
8G40


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 97 ligands in PDB entry 8G40. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
a
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
c
3 11BETA-D-MANNOPYRANOSE
lig 7
MAN
c
4 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
c
5 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
c
6 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
c
7 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
c
8 11ALPHA-D-MANNOPYRANOSE
lig 12
NAG
k
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
k
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
k
3 11BETA-D-MANNOPYRANOSE
lig 15
MAN
k
4 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
k
5 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
k
6 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
k
7 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
k
8 11ALPHA-D-MANNOPYRANOSE
lig 20
NAG
s
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
s
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
s
3 11BETA-D-MANNOPYRANOSE
lig 23
MAN
s
4 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
s
5 11ALPHA-D-MANNOPYRANOSE
lig 25
MAN
s
6 11ALPHA-D-MANNOPYRANOSE
lig 26
MAN
s
7 11ALPHA-D-MANNOPYRANOSE
lig 27
NAG
3
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
3
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
BMA
3
3 11BETA-D-MANNOPYRANOSE
lig 30
MAN
3
4 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
3
5 11ALPHA-D-MANNOPYRANOSE
lig 32
MAN
3
6 11ALPHA-D-MANNOPYRANOSE
lig 33
MAN
3
7 11ALPHA-D-MANNOPYRANOSE
lig 34
MAN
3
8 11ALPHA-D-MANNOPYRANOSE
lig 35
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
BMA
b
3 11BETA-D-MANNOPYRANOSE
lig 38
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
BMA
d
3 11BETA-D-MANNOPYRANOSE
lig 41
FUC
d
4 10ALPHA-L-FUCOPYRANOSE
lig 42
NAG
e
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
FUC
e
3 10ALPHA-L-FUCOPYRANOSE
lig 45
NAG
g
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
g
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
i
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
i
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
BMA
i
3 11BETA-D-MANNOPYRANOSE
lig 50
NAG
j
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
j
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
BMA
j
3 11BETA-D-MANNOPYRANOSE
lig 53
MAN
j
4 11ALPHA-D-MANNOPYRANOSE
lig 54
NAG
l
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
l
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
BMA
l
3 11BETA-D-MANNOPYRANOSE
lig 57
FUC
l
4 10ALPHA-L-FUCOPYRANOSE
lig 58
NAG
o
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 59
NAG
o
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
NAG
q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
BMA
q
3 11BETA-D-MANNOPYRANOSE
lig 63
NAG
r
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
NAG
r
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 65
BMA
r
3 11BETA-D-MANNOPYRANOSE
lig 66
NAG
t
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 67
NAG
t
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
BMA
t
3 11BETA-D-MANNOPYRANOSE
lig 69
FUC
t
4 10ALPHA-L-FUCOPYRANOSE
lig 70
NAG
w
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
NAG
w
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
NAG
1
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 73
NAG
1
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 74
BMA
1
3 11BETA-D-MANNOPYRANOSE
lig 75
NAG
2
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 76
NAG
2
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 77
BMA
2
3 11BETA-D-MANNOPYRANOSE
lig 78
NAG
4
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 79
NAG
4
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 80
BMA
4
3 11BETA-D-MANNOPYRANOSE
lig 81
FUC
4
4 10ALPHA-L-FUCOPYRANOSE
lig 82
NAG
5
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 83
NAG
5
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 84
FUC
5
3 10ALPHA-L-FUCOPYRANOSE
lig 85
NAG
7
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 86
NAG
7
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 87
NAG
m
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 88
NAG
m
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 89
FUC
m
3 10ALPHA-L-FUCOPYRANOSE
lig 90
NAG
u
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 91
NAG
u
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 92
FUC
u
3 10ALPHA-L-FUCOPYRANOSE
lig 93
CA
G
501 1CALCIUM ION
lig 94
CA
G
502 1CALCIUM ION
lig 95
CA
H
2000 1CALCIUM ION
lig 96
CA
I
2000 1CALCIUM ION
lig 97
CA
J
2000 1CALCIUM ION