Analysis of Ligand-Protein Contacts in PDB entry:
8G6X


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 280 ligands in PDB entry 8G6X. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
1MG
a
745 241N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 2
PSU
a
746 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 3
5MU
a
747 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 4
PSU
a
955 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 5
6MZ
a
1618 23N6-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 6
2MG
a
1835 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 7
PSU
a
1911 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 8
3TD
a
1915 21 TETRAHYDROPYRIMIDIN-5-YL)-5-O-PHOSPHONO-D
lig 9
PSU
a
1917 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 10
5MU
a
1939 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 11
5MC
a
1962 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 12
6MZ
a
2030 23N6-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 13
G7M
a
2069 24N7-METHYL-GUANOSINE-5'-MONOPHOSPHATE
lig 14
OMG
a
2251 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 15
2MG
a
2445 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 16
H2U
a
2449 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 17
PSU
a
2457 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 18
OMC
a
2498 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 19
2MA
a
2503 232-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 20
PSU
a
2504 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 21
OMU
a
2552 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 22
PSU
a
2580 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 23
PSU
a
2604 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 24
PSU
a
2605 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 25
MEQ
d
150 10N5-METHYLGLUTAMINE
lig 26
4D4
l
81 12 ACID
lig 27
MS6
l
82 8(2S)-2-AMINO-4-(METHYLSULFANYL)BUTANE-1-TH
lig 28
MG
a
6001 1MAGNESIUM ION
lig 29
MG
a
6002 1MAGNESIUM ION
lig 30
MG
a
6003 1MAGNESIUM ION
lig 31
MG
a
6004 1MAGNESIUM ION
lig 32
MG
a
6005 1MAGNESIUM ION
lig 33
MG
a
6006 1MAGNESIUM ION
lig 34
MG
a
6007 1MAGNESIUM ION
lig 35
MG
a
6008 1MAGNESIUM ION
lig 36
MG
a
6009 1MAGNESIUM ION
lig 37
MG
a
6010 1MAGNESIUM ION
lig 38
MG
a
6011 1MAGNESIUM ION
lig 39
MG
a
6012 1MAGNESIUM ION
lig 40
MG
a
6013 1MAGNESIUM ION
lig 41
MG
a
6014 1MAGNESIUM ION
lig 42
MG
a
6015 1MAGNESIUM ION
lig 43
MG
a
6016 1MAGNESIUM ION
lig 44
MG
a
6017 1MAGNESIUM ION
lig 45
MG
a
6018 1MAGNESIUM ION
lig 46
MG
a
6019 1MAGNESIUM ION
lig 47
MG
a
6020 1MAGNESIUM ION
lig 48
MG
a
6021 1MAGNESIUM ION
lig 49
MG
a
6022 1MAGNESIUM ION
lig 50
MG
a
6023 1MAGNESIUM ION
lig 51
MG
a
6024 1MAGNESIUM ION
lig 52
MG
a
6025 1MAGNESIUM ION
lig 53
MG
a
6026 1MAGNESIUM ION
lig 54
MG
a
6027 1MAGNESIUM ION
lig 55
MG
a
6028 1MAGNESIUM ION
lig 56
MG
a
6029 1MAGNESIUM ION
lig 57
MG
a
6030 1MAGNESIUM ION
lig 58
MG
a
6031 1MAGNESIUM ION
lig 59
MG
a
6032 1MAGNESIUM ION
lig 60
MG
a
6033 1MAGNESIUM ION
lig 61
MG
a
6034 1MAGNESIUM ION
lig 62
MG
a
6035 1MAGNESIUM ION
lig 63
MG
a
6036 1MAGNESIUM ION
lig 64
MG
a
6037 1MAGNESIUM ION
lig 65
MG
a
6038 1MAGNESIUM ION
lig 66
MG
a
6039 1MAGNESIUM ION
lig 67
MG
a
6040 1MAGNESIUM ION
lig 68
MG
a
6041 1MAGNESIUM ION
lig 69
MG
a
6042 1MAGNESIUM ION
lig 70
MG
a
6043 1MAGNESIUM ION
lig 71
MG
a
6044 1MAGNESIUM ION
lig 72
MG
a
6045 1MAGNESIUM ION
lig 73
MG
a
6046 1MAGNESIUM ION
lig 74
MG
a
6047 1MAGNESIUM ION
lig 75
MG
a
6048 1MAGNESIUM ION
lig 76
MG
a
6049 1MAGNESIUM ION
lig 77
MG
a
6050 1MAGNESIUM ION
lig 78
MG
a
6051 1MAGNESIUM ION
lig 79
MG
a
6052 1MAGNESIUM ION
lig 80
MG
a
6053 1MAGNESIUM ION
lig 81
MG
a
6054 1MAGNESIUM ION
lig 82
MG
a
6055 1MAGNESIUM ION
lig 83
MG
a
6056 1MAGNESIUM ION
lig 84
MG
a
6057 1MAGNESIUM ION
lig 85
MG
a
6058 1MAGNESIUM ION
lig 86
MG
a
6059 1MAGNESIUM ION
lig 87
MG
a
6060 1MAGNESIUM ION
lig 88
MG
a
6061 1MAGNESIUM ION
lig 89
MG
a
6062 1MAGNESIUM ION
lig 90
MG
a
6063 1MAGNESIUM ION
lig 91
MG
a
6064 1MAGNESIUM ION
lig 92
MG
a
6065 1MAGNESIUM ION
lig 93
MG
a
6066 1MAGNESIUM ION
lig 94
MG
a
6067 1MAGNESIUM ION
lig 95
MG
a
6068 1MAGNESIUM ION
lig 96
MG
a
6069 1MAGNESIUM ION
lig 97
MG
a
6070 1MAGNESIUM ION
lig 98
MG
a
6071 1MAGNESIUM ION
lig 99
MG
a
6072 1MAGNESIUM ION
lig 100
MG
a
6073 1MAGNESIUM ION
lig 101
MG
a
6074 1MAGNESIUM ION
lig 102
MG
a
6075 1MAGNESIUM ION
lig 103
MG
a
6076 1MAGNESIUM ION
lig 104
MG
a
6077 1MAGNESIUM ION
lig 105
MG
a
6078 1MAGNESIUM ION
lig 106
MG
a
6079 1MAGNESIUM ION
lig 107
MG
a
6080 1MAGNESIUM ION
lig 108
MG
a
6081 1MAGNESIUM ION
lig 109
MG
a
6082 1MAGNESIUM ION
lig 110
MG
a
6083 1MAGNESIUM ION
lig 111
MG
a
6084 1MAGNESIUM ION
lig 112
MG
a
6085 1MAGNESIUM ION
lig 113
MG
a
6086 1MAGNESIUM ION
lig 114
MG
a
6087 1MAGNESIUM ION
lig 115
MG
a
6088 1MAGNESIUM ION
lig 116
MG
a
6089 1MAGNESIUM ION
lig 117
MG
a
6090 1MAGNESIUM ION
lig 118
MG
a
6091 1MAGNESIUM ION
lig 119
MG
a
6092 1MAGNESIUM ION
lig 120
MG
a
6093 1MAGNESIUM ION
lig 121
MG
a
6094 1MAGNESIUM ION
lig 122
MG
a
6095 1MAGNESIUM ION
lig 123
MG
a
6096 1MAGNESIUM ION
lig 124
MG
a
6097 1MAGNESIUM ION
lig 125
MG
a
6098 1MAGNESIUM ION
lig 126
MG
a
6099 1MAGNESIUM ION
lig 127
MG
a
6100 1MAGNESIUM ION
lig 128
MG
a
6101 1MAGNESIUM ION
lig 129
MG
a
6102 1MAGNESIUM ION
lig 130
MG
a
6103 1MAGNESIUM ION
lig 131
MG
a
6104 1MAGNESIUM ION
lig 132
MG
a
6105 1MAGNESIUM ION
lig 133
MG
a
6106 1MAGNESIUM ION
lig 134
MG
a
6107 1MAGNESIUM ION
lig 135
MG
a
6108 1MAGNESIUM ION
lig 136
MG
a
6109 1MAGNESIUM ION
lig 137
MG
a
6110 1MAGNESIUM ION
lig 138
MG
a
6111 1MAGNESIUM ION
lig 139
MG
a
6112 1MAGNESIUM ION
lig 140
MG
a
6113 1MAGNESIUM ION
lig 141
MG
a
6114 1MAGNESIUM ION
lig 142
MG
a
6115 1MAGNESIUM ION
lig 143
MG
a
6116 1MAGNESIUM ION
lig 144
MG
a
6117 1MAGNESIUM ION
lig 145
MG
a
6118 1MAGNESIUM ION
lig 146
MG
a
6119 1MAGNESIUM ION
lig 147
MG
a
6120 1MAGNESIUM ION
lig 148
MG
a
6121 1MAGNESIUM ION
lig 149
MG
a
6122 1MAGNESIUM ION
lig 150
MG
a
6123 1MAGNESIUM ION
lig 151
MG
a
6124 1MAGNESIUM ION
lig 152
MG
a
6125 1MAGNESIUM ION
lig 153
MG
a
6126 1MAGNESIUM ION
lig 154
MG
a
6127 1MAGNESIUM ION
lig 155
MG
a
6128 1MAGNESIUM ION
lig 156
MG
a
6129 1MAGNESIUM ION
lig 157
MG
a
6130 1MAGNESIUM ION
lig 158
MG
a
6131 1MAGNESIUM ION
lig 159
MG
a
6132 1MAGNESIUM ION
lig 160
MG
a
6133 1MAGNESIUM ION
lig 161
MG
a
6134 1MAGNESIUM ION
lig 162
MG
a
6135 1MAGNESIUM ION
lig 163
MG
a
6136 1MAGNESIUM ION
lig 164
MG
a
6137 1MAGNESIUM ION
lig 165
MG
a
6138 1MAGNESIUM ION
lig 166
MG
a
6139 1MAGNESIUM ION
lig 167
MG
a
6140 1MAGNESIUM ION
lig 168
MG
a
6141 1MAGNESIUM ION
lig 169
MG
a
6142 1MAGNESIUM ION
lig 170
MG
a
6143 1MAGNESIUM ION
lig 171
MG
a
6144 1MAGNESIUM ION
lig 172
MG
a
6145 1MAGNESIUM ION
lig 173
MG
a
6146 1MAGNESIUM ION
lig 174
MG
a
6147 1MAGNESIUM ION
lig 175
MG
a
6148 1MAGNESIUM ION
lig 176
MG
a
6149 1MAGNESIUM ION
lig 177
MG
a
6150 1MAGNESIUM ION
lig 178
MG
a
6151 1MAGNESIUM ION
lig 179
MG
a
6152 1MAGNESIUM ION
lig 180
MG
a
6153 1MAGNESIUM ION
lig 181
MG
a
6154 1MAGNESIUM ION
lig 182
MG
a
6155 1MAGNESIUM ION
lig 183
MG
a
6156 1MAGNESIUM ION
lig 184
MG
a
6157 1MAGNESIUM ION
lig 185
MG
a
6158 1MAGNESIUM ION
lig 186
MG
a
6159 1MAGNESIUM ION
lig 187
MG
a
6160 1MAGNESIUM ION
lig 188
MG
a
6161 1MAGNESIUM ION
lig 189
MG
a
6162 1MAGNESIUM ION
lig 190
MG
a
6163 1MAGNESIUM ION
lig 191
MG
a
6164 1MAGNESIUM ION
lig 192
MG
a
6165 1MAGNESIUM ION
lig 193
MG
a
6166 1MAGNESIUM ION
lig 194
MG
a
6167 1MAGNESIUM ION
lig 195
MG
a
6168 1MAGNESIUM ION
lig 196
MG
a
6169 1MAGNESIUM ION
lig 197
MG
a
6170 1MAGNESIUM ION
lig 198
MG
a
6171 1MAGNESIUM ION
lig 199
MG
a
6172 1MAGNESIUM ION
lig 200
MG
a
6173 1MAGNESIUM ION
lig 201
MG
a
6174 1MAGNESIUM ION
lig 202
MG
a
6175 1MAGNESIUM ION
lig 203
MG
a
6176 1MAGNESIUM ION
lig 204
MG
a
6177 1MAGNESIUM ION
lig 205
MG
a
6178 1MAGNESIUM ION
lig 206
MG
a
6179 1MAGNESIUM ION
lig 207
MG
a
6180 1MAGNESIUM ION
lig 208
MG
a
6181 1MAGNESIUM ION
lig 209
MG
a
6182 1MAGNESIUM ION
lig 210
MG
a
6183 1MAGNESIUM ION
lig 211
MG
a
6184 1MAGNESIUM ION
lig 212
MG
a
6185 1MAGNESIUM ION
lig 213
MG
a
6186 1MAGNESIUM ION
lig 214
MG
a
6187 1MAGNESIUM ION
lig 215
MG
a
6188 1MAGNESIUM ION
lig 216
MG
a
6189 1MAGNESIUM ION
lig 217
MG
a
6190 1MAGNESIUM ION
lig 218
MG
a
6191 1MAGNESIUM ION
lig 219
MG
a
6192 1MAGNESIUM ION
lig 220
MG
a
6193 1MAGNESIUM ION
lig 221
MG
a
6194 1MAGNESIUM ION
lig 222
MG
a
6195 1MAGNESIUM ION
lig 223
MG
a
6196 1MAGNESIUM ION
lig 224
MG
a
6197 1MAGNESIUM ION
lig 225
MG
a
6198 1MAGNESIUM ION
lig 226
SPD
a
6199 10SPERMIDINE
lig 227
SPD
a
6200 10SPERMIDINE
lig 228
SPD
a
6201 10SPERMIDINE
lig 229
SPD
a
6202 10SPERMIDINE
lig 230
SPD
a
6203 10SPERMIDINE
lig 231
SPD
a
6204 10SPERMIDINE
lig 232
SPD
a
6205 10SPERMIDINE
lig 233
SPD
a
6206 10SPERMIDINE
lig 234
SPD
a
6207 10SPERMIDINE
lig 235
SPD
a
6208 10SPERMIDINE
lig 236
SPD
a
6209 10SPERMIDINE
lig 237
SPD
a
6210 10SPERMIDINE
lig 238
SPD
a
6211 10SPERMIDINE
lig 239
SPD
a
6212 10SPERMIDINE
lig 240
SPM
a
6213 14SPERMINE
lig 241
SPD
a
6214 10SPERMIDINE
lig 242
K
a
6215 1POTASSIUM ION
lig 243
SPD
a
6216 10SPERMIDINE
lig 244
SPD
a
6217 10SPERMIDINE
lig 245
K
a
6218 1POTASSIUM ION
lig 246
K
a
6219 1POTASSIUM ION
lig 247
K
a
6220 1POTASSIUM ION
lig 248
K
a
6221 1POTASSIUM ION
lig 249
FME
a
6222 10N-FORMYLMETHIONINE
lig 250
MG
a
6223 1MAGNESIUM ION
lig 251
MG
a
6224 1MAGNESIUM ION
lig 252
MG
a
6225 1MAGNESIUM ION
lig 253
MG
a
6226 1MAGNESIUM ION
lig 254
MG
a
6227 1MAGNESIUM ION
lig 255
MG
a
6228 1MAGNESIUM ION
lig 256
MG
a
6229 1MAGNESIUM ION
lig 257
MG
a
6230 1MAGNESIUM ION
lig 258
MG
a
6231 1MAGNESIUM ION
lig 259
MG
a
6232 1MAGNESIUM ION
lig 260
MG
a
6233 1MAGNESIUM ION
lig 261
MG
a
6234 1MAGNESIUM ION
lig 262
MG
a
6235 1MAGNESIUM ION
lig 263
MG
b
201 1MAGNESIUM ION
lig 264
MG
b
202 1MAGNESIUM ION
lig 265
MG
b
203 1MAGNESIUM ION
lig 266
MG
b
204 1MAGNESIUM ION
lig 267
MG
b
205 1MAGNESIUM ION
lig 268
MG
c
301 1MAGNESIUM ION
lig 269
K
c
302 1POTASSIUM ION
lig 270
MG
c
303 1MAGNESIUM ION
lig 271
MG
d
301 1MAGNESIUM ION
lig 272
K
e
301 1POTASSIUM ION
lig 273
MG
m
201 1MAGNESIUM ION
lig 274
MG
z
101 1MAGNESIUM ION
lig 275
ZN
3
101 1ZINC ION
lig 276
ZN
4
101 1ZINC ION
lig 277
3AB
Y
101 103-AMINOBENZAMIDE
lig 278
MG
Y
102 1MAGNESIUM ION
lig 279
8AN
Z
101 223'-AMINO-3'-DEOXYADENOSINE 5'-(DIHYDROGEN
lig 280
MG
Z
102 1MAGNESIUM ION