Analysis of Ligand-Protein Contacts in PDB entry:
8GBU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 8GBU. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
YWE
A
501 32 1H-INDEN-1-YL}CARBAMATE
lig 2
YWE
A
502 32 1H-INDEN-1-YL}CARBAMATE
lig 3
EDO
A
503 41,2-ETHANEDIOL
lig 4
YWE
B
501 32 1H-INDEN-1-YL}CARBAMATE
lig 5
YWE
C
501 32 1H-INDEN-1-YL}CARBAMATE
lig 6
EDO
C
502 41,2-ETHANEDIOL
lig 7
EDO
C
503 41,2-ETHANEDIOL
lig 8
EDO
D
201 41,2-ETHANEDIOL
lig 9
YWE
E
501 32 1H-INDEN-1-YL}CARBAMATE
lig 10
YWE
E
502 32 1H-INDEN-1-YL}CARBAMATE
lig 11
EDO
E
503 41,2-ETHANEDIOL
lig 12
EDO
E
504 41,2-ETHANEDIOL
lig 13
EDO
F
201 41,2-ETHANEDIOL
lig 14
EDO
F
202 41,2-ETHANEDIOL