Analysis of Ligand-Protein Contacts in PDB entry:
8GD8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 8GD8. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NIO
A
1 8NICOTINIC ACID
lig 2
AIB
A
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 3
AIB
A
7 6ALPHA-AMINOISOBUTYRIC ACID
lig 4
AIB
A
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 5
I77
A
11 195'-(HYDRAZINECARBONYL)[2,2'-BIPYRIDINE]-5-
lig 6
NIO
B
1 8NICOTINIC ACID
lig 7
AIB
B
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 8
AIB
B
7 6ALPHA-AMINOISOBUTYRIC ACID
lig 9
AIB
B
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 10
I77
B
11 195'-(HYDRAZINECARBONYL)[2,2'-BIPYRIDINE]-5-
lig 11
NIO
C
1 8NICOTINIC ACID
lig 12
AIB
C
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 13
AIB
C
7 6ALPHA-AMINOISOBUTYRIC ACID
lig 14
AIB
C
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 15
I77
C
11 195'-(HYDRAZINECARBONYL)[2,2'-BIPYRIDINE]-5-
lig 16
NIO
D
1 8NICOTINIC ACID
lig 17
AIB
D
3 6ALPHA-AMINOISOBUTYRIC ACID
lig 18
AIB
D
7 6ALPHA-AMINOISOBUTYRIC ACID
lig 19
AIB
D
9 6ALPHA-AMINOISOBUTYRIC ACID
lig 20
I77
D
11 195'-(HYDRAZINECARBONYL)[2,2'-BIPYRIDINE]-5-