Analysis of Ligand-Protein Contacts in PDB entry:
8GI8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 8GI8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
RET
A
301 20RETINAL
lig 2
NA
A
302 1SODIUM ION
lig 3
CLR
A
303 28CHOLESTEROL
lig 4
CLR
A
304 28CHOLESTEROL
lig 5
CLR
A
305 28CHOLESTEROL
lig 6
PEE
A
306 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 7
PEE
A
307 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 8
PEE
A
308 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 9
PEE
A
309 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 10
PEE
A
310 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM