Analysis of Ligand-Protein Contacts in PDB entry:
8GM5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 6 ligands in PDB entry 8GM5. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
348 11PHOSPHOTHREONINE
lig 2
ADP
A
801 27ADENOSINE-5'-DIPHOSPHATE
lig 3
EKI
A
802 21 TETRAHYDROPYRIDO[2,3-D]PYRIMIDINE-6-CARBO
lig 4
ZN
A
803 1ZINC ION
lig 5
CA
B
201 1CALCIUM ION
lig 6
CA
B
202 1CALCIUM ION