Analysis of Ligand-Protein Contacts in PDB entry:
8GN7


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 50 ligands in PDB entry 8GN7. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CLR
A
301 28CHOLESTEROL
lig 2
CLR
A
302 28CHOLESTEROL
lig 3
PTY
A
303 39PHOSPHATIDYLETHANOLAMINE
lig 4
3PE
A
304 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 5
CLR
A
305 28CHOLESTEROL
lig 6
3PE
B
301 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 7
CLR
B
302 28CHOLESTEROL
lig 8
CLR
B
303 28CHOLESTEROL
lig 9
CLR
B
304 28CHOLESTEROL
lig 10
PTY
B
305 39PHOSPHATIDYLETHANOLAMINE
lig 11
3PE
G
301 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 12
CLR
G
302 28CHOLESTEROL
lig 13
CLR
G
303 28CHOLESTEROL
lig 14
CLR
G
304 28CHOLESTEROL
lig 15
PTY
G
305 39PHOSPHATIDYLETHANOLAMINE
lig 16
3PE
J
301 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 17
CLR
J
302 28CHOLESTEROL
lig 18
CLR
J
303 28CHOLESTEROL
lig 19
PTY
J
304 39PHOSPHATIDYLETHANOLAMINE
lig 20
CLR
M
301 28CHOLESTEROL
lig 21
3PE
M
302 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 22
CLR
M
303 28CHOLESTEROL
lig 23
CLR
M
304 28CHOLESTEROL
lig 24
CLR
M
305 28CHOLESTEROL
lig 25
PTY
M
306 39PHOSPHATIDYLETHANOLAMINE
lig 26
CLR
P
301 28CHOLESTEROL
lig 27
PTY
P
302 39PHOSPHATIDYLETHANOLAMINE
lig 28
3PE
P
303 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 29
CLR
P
304 28CHOLESTEROL
lig 30
CLR
S
301 28CHOLESTEROL
lig 31
3PE
S
302 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 32
CLR
S
303 28CHOLESTEROL
lig 33
CLR
S
304 28CHOLESTEROL
lig 34
CLR
S
305 28CHOLESTEROL
lig 35
PTY
S
306 39PHOSPHATIDYLETHANOLAMINE
lig 36
3PE
V
301 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 37
CLR
V
302 28CHOLESTEROL
lig 38
CLR
V
303 28CHOLESTEROL
lig 39
PTY
V
304 39PHOSPHATIDYLETHANOLAMINE
lig 40
CLR
Y
301 28CHOLESTEROL
lig 41
3PE
Y
302 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 42
CLR
Y
303 28CHOLESTEROL
lig 43
CLR
Y
304 28CHOLESTEROL
lig 44
CLR
Y
305 28CHOLESTEROL
lig 45
PTY
Y
306 39PHOSPHATIDYLETHANOLAMINE
lig 46
3PE
b
301 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 47
CLR
b
302 28CHOLESTEROL
lig 48
CLR
b
303 28CHOLESTEROL
lig 49
CLR
b
304 28CHOLESTEROL
lig 50
PTY
b
305 39PHOSPHATIDYLETHANOLAMINE