Analysis of Ligand-Protein Contacts in PDB entry:
8GO8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 10 ligands in PDB entry 8GO8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
V
334 10PHOSPHOSERINE
lig 2
TPO
V
336 11PHOSPHOTHREONINE
lig 3
SEP
V
338 10PHOSPHOSERINE
lig 4
TPO
V
339 11PHOSPHOTHREONINE
lig 5
TPO
V
342 11PHOSPHOTHREONINE
lig 6
SEP
U
334 10PHOSPHOSERINE
lig 7
TPO
U
336 11PHOSPHOTHREONINE
lig 8
SEP
U
338 10PHOSPHOSERINE
lig 9
TPO
U
339 11PHOSPHOTHREONINE
lig 10
TPO
U
342 11PHOSPHOTHREONINE