Analysis of Ligand-Protein Contacts in PDB entry:
8GPJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 126 ligands in PDB entry 8GPJ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 7
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 10
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 13
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 18
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 20
MAN
K
6 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
K
7 11ALPHA-D-MANNOPYRANOSE
lig 22
MAN
K
8 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
K
9 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
K
10 11ALPHA-D-MANNOPYRANOSE
lig 25
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 30
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 32
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 35
MAN
O
4 11ALPHA-D-MANNOPYRANOSE
lig 36
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
BMA
a
3 11BETA-D-MANNOPYRANOSE
lig 49
MAN
a
4 11ALPHA-D-MANNOPYRANOSE
lig 50
MAN
a
5 11ALPHA-D-MANNOPYRANOSE
lig 51
MAN
a
6 11ALPHA-D-MANNOPYRANOSE
lig 52
MAN
a
7 11ALPHA-D-MANNOPYRANOSE
lig 53
MAN
a
8 11ALPHA-D-MANNOPYRANOSE
lig 54
MAN
a
9 11ALPHA-D-MANNOPYRANOSE
lig 55
MAN
a
10 11ALPHA-D-MANNOPYRANOSE
lig 56
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 59
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
BMA
c
3 11BETA-D-MANNOPYRANOSE
lig 61
MAN
c
4 11ALPHA-D-MANNOPYRANOSE
lig 62
MAN
c
5 11ALPHA-D-MANNOPYRANOSE
lig 63
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 65
BMA
d
3 11BETA-D-MANNOPYRANOSE
lig 66
MAN
d
4 11ALPHA-D-MANNOPYRANOSE
lig 67
NAG
e
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
NAG
f
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
NAG
f
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
NAG
g
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
NAG
g
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 73
NAG
h
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 74
NAG
h
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 75
NAG
i
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 76
NAG
i
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 77
NAG
j
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 78
NAG
j
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 79
BMA
j
3 11BETA-D-MANNOPYRANOSE
lig 80
MAN
j
4 11ALPHA-D-MANNOPYRANOSE
lig 81
MAN
j
5 11ALPHA-D-MANNOPYRANOSE
lig 82
MAN
j
6 11ALPHA-D-MANNOPYRANOSE
lig 83
MAN
j
7 11ALPHA-D-MANNOPYRANOSE
lig 84
MAN
j
8 11ALPHA-D-MANNOPYRANOSE
lig 85
MAN
j
9 11ALPHA-D-MANNOPYRANOSE
lig 86
MAN
j
10 11ALPHA-D-MANNOPYRANOSE
lig 87
MAN
j
11 11ALPHA-D-MANNOPYRANOSE
lig 88
NAG
k
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 89
NAG
k
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 90
NAG
l
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 91
NAG
l
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 92
BMA
l
3 11BETA-D-MANNOPYRANOSE
lig 93
MAN
l
4 11ALPHA-D-MANNOPYRANOSE
lig 94
MAN
l
5 11ALPHA-D-MANNOPYRANOSE
lig 95
NAG
m
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 96
NAG
m
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 97
BMA
m
3 11BETA-D-MANNOPYRANOSE
lig 98
MAN
m
4 11ALPHA-D-MANNOPYRANOSE
lig 99
NAG
n
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 100
NAG
n
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 101
NAG
o
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 102
NAG
o
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 103
NAG
p
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 104
NAG
p
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 105
NAG
U
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 106
NAG
U
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 107
NAG
V
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 108
NAG
W
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 109
NAG
X
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 110
NAG
X
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 111
NAG
X
703 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 112
NAG
X
704 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 113
NAG
X
705 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 114
NAG
X
706 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 115
NAG
Y
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 116
NAG
Y
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 117
NAG
Y
703 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 118
NAG
Y
704 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 119
NAG
Y
705 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 120
NAG
Y
706 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 121
NAG
Z
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 122
NAG
Z
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 123
NAG
Z
703 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 124
NAG
Z
704 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 125
NAG
Z
705 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 126
NAG
Z
706 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE