Analysis of Ligand-Protein Contacts in PDB entry:
8GYR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 8GYR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
K
A
201 1POTASSIUM ION
lig 2
K
A
202 1POTASSIUM ION
lig 3
CL
A
203 1CHLORIDE ION
lig 4
EDO
A
204 41,2-ETHANEDIOL
lig 5
EDO
A
205 41,2-ETHANEDIOL
lig 6
PO4
A
206 5PHOSPHATE ION
lig 7
NA
A
207 1SODIUM ION
lig 8
NA
A
208 1SODIUM ION
lig 9
CA
A
209 1CALCIUM ION
lig 10
IOD
A
210 1IODIDE ION
lig 11
NA
A
211 1SODIUM ION
lig 12
CA
B
201 1CALCIUM ION
lig 13
IOD
B
202 1IODIDE ION
lig 14
K
B
203 1POTASSIUM ION
lig 15
K
B
204 1POTASSIUM ION
lig 16
EDO
B
205 41,2-ETHANEDIOL
lig 17
EDO
B
206 41,2-ETHANEDIOL
lig 18
PO4
B
207 5PHOSPHATE ION
lig 19
NA
B
208 1SODIUM ION
lig 20
K
B
209 1POTASSIUM ION
lig 21
NA
B
210 1SODIUM ION