Analysis of Ligand-Protein Contacts in PDB entry:
8J0D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 74 ligands in PDB entry 8J0D. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CLA
3
601 65CHLOROPHYLL A
lig 2
CLA
3
602 65CHLOROPHYLL A
lig 3
CLA
3
603 65CHLOROPHYLL A
lig 4
CLA
3
604 48CHLOROPHYLL A
lig 5
CLA
3
605 65CHLOROPHYLL A
lig 6
CLA
3
606 65CHLOROPHYLL A
lig 7
CLA
3
607 65CHLOROPHYLL A
lig 8
CLA
3
608 51CHLOROPHYLL A
lig 9
KC1
3
609 45CHLOROPHYLL C1
lig 10
CLA
3
610 41CHLOROPHYLL A
lig 11
CLA
3
611 56CHLOROPHYLL A
lig 12
CLA
3
612 61CHLOROPHYLL A
lig 13
A86
3
613 48 CAROTEN-3'- YL ACETATE
lig 14
DD6
3
614 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 15
LMG
3
615 311,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 16
LMG
3
616 231,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 17
LHG
3
617 271,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 18
LHG
3
618 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 19
CLA
3
619 55CHLOROPHYLL A
lig 20
DGD
3
620 39DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 21
A86
4
301 48 CAROTEN-3'- YL ACETATE
lig 22
A86
4
302 48 CAROTEN-3'- YL ACETATE
lig 23
DD6
4
303 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 24
A86
4
304 48 CAROTEN-3'- YL ACETATE
lig 25
CLA
4
305 55CHLOROPHYLL A
lig 26
CLA
4
306 65CHLOROPHYLL A
lig 27
KC2
4
307 45CHLOROPHYLL C2
lig 28
CLA
4
308 65CHLOROPHYLL A
lig 29
CLA
4
309 65CHLOROPHYLL A
lig 30
CLA
4
310 46CHLOROPHYLL A
lig 31
CLA
4
311 60CHLOROPHYLL A
lig 32
CLA
4
312 51CHLOROPHYLL A
lig 33
CLA
4
313 41CHLOROPHYLL A
lig 34
CLA
4
314 56CHLOROPHYLL A
lig 35
CLA
4
315 47CHLOROPHYLL A
lig 36
CLA
4
316 52CHLOROPHYLL A
lig 37
LMT
4
317 35DODECYL-BETA-D-MALTOSIDE
lig 38
LHG
4
318 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 39
A86
5
301 48 CAROTEN-3'- YL ACETATE
lig 40
A86
5
302 48 CAROTEN-3'- YL ACETATE
lig 41
A86
5
303 48 CAROTEN-3'- YL ACETATE
lig 42
A86
5
304 48 CAROTEN-3'- YL ACETATE
lig 43
A86
5
305 47 CAROTEN-3'- YL ACETATE
lig 44
A86
5
306 48 CAROTEN-3'- YL ACETATE
lig 45
A86
5
307 48 CAROTEN-3'- YL ACETATE
lig 46
CLA
5
308 46CHLOROPHYLL A
lig 47
CLA
5
309 55CHLOROPHYLL A
lig 48
KC2
5
310 45CHLOROPHYLL C2
lig 49
CLA
5
311 55CHLOROPHYLL A
lig 50
CLA
5
312 46CHLOROPHYLL A
lig 51
CLA
5
313 65CHLOROPHYLL A
lig 52
CLA
5
314 55CHLOROPHYLL A
lig 53
KC1
5
315 45CHLOROPHYLL C1
lig 54
CLA
5
316 41CHLOROPHYLL A
lig 55
CLA
5
317 38CHLOROPHYLL A
lig 56
LHG
5
318 331,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 57
LMG
5
319 311,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 58
LMT
5
320 31DODECYL-BETA-D-MALTOSIDE
lig 59
A86
5
321 48 CAROTEN-3'- YL ACETATE
lig 60
A86
6
301 48 CAROTEN-3'- YL ACETATE
lig 61
A86
6
302 48 CAROTEN-3'- YL ACETATE
lig 62
A86
6
303 48 CAROTEN-3'- YL ACETATE
lig 63
A86
6
304 48 CAROTEN-3'- YL ACETATE
lig 64
A86
6
305 48 CAROTEN-3'- YL ACETATE
lig 65
CLA
6
306 53CHLOROPHYLL A
lig 66
CLA
6
307 54CHLOROPHYLL A
lig 67
KC2
6
308 45CHLOROPHYLL C2
lig 68
CLA
6
309 52CHLOROPHYLL A
lig 69
CLA
6
310 46CHLOROPHYLL A
lig 70
CLA
6
311 65CHLOROPHYLL A
lig 71
CLA
6
312 46CHLOROPHYLL A
lig 72
KC1
6
313 45CHLOROPHYLL C1
lig 73
CLA
6
314 41CHLOROPHYLL A
lig 74
CLA
6
315 39CHLOROPHYLL A