Analysis of Ligand-Protein Contacts in PDB entry:
8JFZ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 70 ligands in PDB entry 8JFZ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 6
FUC
F
6 10ALPHA-L-FUCOPYRANOSE
lig 7
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 10
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
H
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
MAN
H
6 11ALPHA-D-MANNOPYRANOSE
lig 13
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 16
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 17
FUC
I
5 10ALPHA-L-FUCOPYRANOSE
lig 18
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 23
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 25
FUC
K
6 10ALPHA-L-FUCOPYRANOSE
lig 26
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 29
MAN
L
4 11ALPHA-D-MANNOPYRANOSE
lig 30
NAG
L
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
MAN
L
6 11ALPHA-D-MANNOPYRANOSE
lig 32
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 35
MAN
M
4 11ALPHA-D-MANNOPYRANOSE
lig 36
FUC
M
5 10ALPHA-L-FUCOPYRANOSE
lig 37
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
CLR
D
401 28CHOLESTEROL
lig 40
CLR
C
1101 28CHOLESTEROL
lig 41
PCW
C
1102 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 42
PCW
C
1103 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 43
PCW
C
1104 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 44
PCW
C
1105 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 45
PCW
C
1106 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 46
PCW
C
1107 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 47
PCW
C
1108 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 48
PCW
C
1109 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 49
PCW
C
1110 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 50
MG
C
1111 1MAGNESIUM ION
lig 51
MG
C
1112 1MAGNESIUM ION
lig 52
CLR
E
1301 28CHOLESTEROL
lig 53
PCW
E
1302 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 54
CLR
B
401 28CHOLESTEROL
lig 55
CLR
A
1101 28CHOLESTEROL
lig 56
CLR
A
1102 28CHOLESTEROL
lig 57
CLR
A
1103 28CHOLESTEROL
lig 58
PCW
A
1104 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 59
PCW
A
1105 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 60
PCW
A
1106 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 61
PCW
A
1107 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 62
PCW
A
1108 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 63
PCW
A
1109 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 64
PCW
A
1110 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 65
PCW
A
1111 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 66
PCW
A
1112 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 67
MG
A
1113 1MAGNESIUM ION
lig 68
MG
A
1114 1MAGNESIUM ION
lig 69
CLR
G
1301 28CHOLESTEROL
lig 70
PCW
G
1302 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE