Analysis of Ligand-Protein Contacts in PDB entry:
8JJR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 323 ligands in PDB entry 8JJR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CLA
A
601 42CHLOROPHYLL A
lig 2
CLA
A
602 60CHLOROPHYLL A
lig 3
CLA
A
603 55CHLOROPHYLL A
lig 4
CLA
A
604 45CHLOROPHYLL A
lig 5
CLA
A
605 55CHLOROPHYLL A
lig 6
CLA
A
606 47CHLOROPHYLL A
lig 7
CLA
A
607 45CHLOROPHYLL A
lig 8
KC2
A
608 45CHLOROPHYLL C2
lig 9
CLA
A
609 47CHLOROPHYLL A
lig 10
CLA
A
610 55CHLOROPHYLL A
lig 11
CLA
A
611 45CHLOROPHYLL A
lig 12
CLA
A
612 47CHLOROPHYLL A
lig 13
UIX
A
613 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 14
DD6
A
614 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 15
DD6
A
615 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 16
UIX
A
616 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 17
DD6
A
617 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 18
SQD
A
618 28 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 19
CLA
B
601 60CHLOROPHYLL A
lig 20
KC2
B
602 45CHLOROPHYLL C2
lig 21
CLA
B
603 65CHLOROPHYLL A
lig 22
CLA
B
604 47CHLOROPHYLL A
lig 23
CLA
B
605 45CHLOROPHYLL A
lig 24
CLA
B
606 65CHLOROPHYLL A
lig 25
CLA
B
607 60CHLOROPHYLL A
lig 26
KC2
B
608 45CHLOROPHYLL C2
lig 27
CLA
B
609 65CHLOROPHYLL A
lig 28
CLA
B
610 47CHLOROPHYLL A
lig 29
UIX
B
611 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 30
DD6
B
612 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 31
PID
B
613 46PERIDININ
lig 32
DD6
B
614 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 33
UIX
B
615 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 34
DD6
B
616 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 35
CLA
C
201 42CHLOROPHYLL A
lig 36
CLA
C
202 45CHLOROPHYLL A
lig 37
CLA
C
203 65CHLOROPHYLL A
lig 38
CLA
C
204 65CHLOROPHYLL A
lig 39
CLA
C
205 55CHLOROPHYLL A
lig 40
CLA
C
206 47CHLOROPHYLL A
lig 41
CLA
C
207 60CHLOROPHYLL A
lig 42
CLA
C
208 47CHLOROPHYLL A
lig 43
CLA
C
209 45CHLOROPHYLL A
lig 44
KC2
C
210 45CHLOROPHYLL C2
lig 45
CLA
C
211 47CHLOROPHYLL A
lig 46
CLA
C
212 47CHLOROPHYLL A
lig 47
UIX
C
213 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 48
DD6
C
214 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 49
UIX
C
215 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 50
DD6
C
216 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 51
LMG
C
217 341,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 52
CLA
D
601 45CHLOROPHYLL A
lig 53
CLA
D
602 55CHLOROPHYLL A
lig 54
CLA
D
603 55CHLOROPHYLL A
lig 55
CLA
D
604 55CHLOROPHYLL A
lig 56
CLA
D
605 47CHLOROPHYLL A
lig 57
CLA
D
606 45CHLOROPHYLL A
lig 58
CLA
D
607 60CHLOROPHYLL A
lig 59
CLA
D
608 55CHLOROPHYLL A
lig 60
CLA
D
609 45CHLOROPHYLL A
lig 61
CLA
D
610 47CHLOROPHYLL A
lig 62
CLA
D
611 60CHLOROPHYLL A
lig 63
CLA
D
612 55CHLOROPHYLL A
lig 64
DD6
D
613 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 65
DD6
D
614 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 66
DD6
D
615 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 67
UIX
D
616 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 68
DD6
D
617 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 69
LMG
D
618 351,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 70
LMG
D
619 461,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 71
LHG
D
620 461,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 72
DD6
D
621 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 73
KC2
E
601 45CHLOROPHYLL C2
lig 74
CLA
E
602 55CHLOROPHYLL A
lig 75
CLA
E
603 47CHLOROPHYLL A
lig 76
CLA
E
604 55CHLOROPHYLL A
lig 77
CLA
E
605 45CHLOROPHYLL A
lig 78
CLA
E
606 60CHLOROPHYLL A
lig 79
CLA
E
607 65CHLOROPHYLL A
lig 80
CLA
E
608 60CHLOROPHYLL A
lig 81
CLA
E
609 45CHLOROPHYLL A
lig 82
KC2
E
610 45CHLOROPHYLL C2
lig 83
CLA
E
611 60CHLOROPHYLL A
lig 84
CLA
E
612 45CHLOROPHYLL A
lig 85
DD6
E
613 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 86
DD6
E
614 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 87
DD6
E
615 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 88
UIX
E
616 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 89
DD6
E
617 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 90
CLA
F
601 60CHLOROPHYLL A
lig 91
CLA
F
602 56CHLOROPHYLL A
lig 92
CLA
F
603 52CHLOROPHYLL A
lig 93
CLA
F
604 45CHLOROPHYLL A
lig 94
CLA
F
605 45CHLOROPHYLL A
lig 95
CLA
F
606 65CHLOROPHYLL A
lig 96
CLA
F
607 45CHLOROPHYLL A
lig 97
CLA
F
608 45CHLOROPHYLL A
lig 98
KC2
F
609 45CHLOROPHYLL C2
lig 99
CLA
F
610 47CHLOROPHYLL A
lig 100
DD6
F
611 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 101
DD6
F
612 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 102
UIX
F
613 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 103
PID
F
614 46PERIDININ
lig 104
PID
F
615 46PERIDININ
lig 105
LMG
F
616 461,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 106
CLA
F
617 60CHLOROPHYLL A
lig 107
LHG
F
618 371,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 108
CLA
F
619 55CHLOROPHYLL A
lig 109
KC2
G
601 45CHLOROPHYLL C2
lig 110
CLA
G
602 55CHLOROPHYLL A
lig 111
CLA
G
603 50CHLOROPHYLL A
lig 112
CLA
G
604 47CHLOROPHYLL A
lig 113
CLA
G
605 60CHLOROPHYLL A
lig 114
CLA
G
606 65CHLOROPHYLL A
lig 115
CLA
G
607 45CHLOROPHYLL A
lig 116
CLA
G
608 60CHLOROPHYLL A
lig 117
CLA
G
609 55CHLOROPHYLL A
lig 118
CLA
G
610 47CHLOROPHYLL A
lig 119
CLA
G
611 45CHLOROPHYLL A
lig 120
DD6
G
612 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 121
DD6
G
613 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 122
DD6
G
614 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 123
UIX
G
615 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 124
DD6
G
616 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 125
LHG
G
617 341,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 126
DD6
H
301 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 127
KC2
H
302 45CHLOROPHYLL C2
lig 128
CLA
H
303 60CHLOROPHYLL A
lig 129
CLA
H
304 60CHLOROPHYLL A
lig 130
CLA
H
305 60CHLOROPHYLL A
lig 131
CLA
H
306 45CHLOROPHYLL A
lig 132
CLA
H
307 45CHLOROPHYLL A
lig 133
CLA
H
308 55CHLOROPHYLL A
lig 134
CLA
H
309 65CHLOROPHYLL A
lig 135
CLA
H
310 45CHLOROPHYLL A
lig 136
KC2
H
311 45CHLOROPHYLL C2
lig 137
CLA
H
312 42CHLOROPHYLL A
lig 138
CLA
H
313 60CHLOROPHYLL A
lig 139
UIX
H
314 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 140
DD6
H
315 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 141
DD6
H
316 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 142
UIX
H
317 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 143
DD6
H
318 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 144
CLA
H
319 65CHLOROPHYLL A
lig 145
SQD
H
320 46 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 146
CLA
I
601 65CHLOROPHYLL A
lig 147
CLA
I
602 55CHLOROPHYLL A
lig 148
CLA
I
603 65CHLOROPHYLL A
lig 149
KC2
I
604 45CHLOROPHYLL C2
lig 150
CLA
I
605 55CHLOROPHYLL A
lig 151
CLA
I
606 55CHLOROPHYLL A
lig 152
CLA
I
607 61CHLOROPHYLL A
lig 153
CLA
I
608 60CHLOROPHYLL A
lig 154
CLA
I
609 45CHLOROPHYLL A
lig 155
CLA
I
610 55CHLOROPHYLL A
lig 156
CLA
I
611 42CHLOROPHYLL A
lig 157
UIX
I
612 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 158
DD6
I
613 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 159
PID
I
614 46PERIDININ
lig 160
DD6
I
615 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 161
CLA
I
616 65CHLOROPHYLL A
lig 162
CLA
J
601 45CHLOROPHYLL A
lig 163
KC2
J
602 45CHLOROPHYLL C2
lig 164
CLA
J
603 60CHLOROPHYLL A
lig 165
KC2
J
604 45CHLOROPHYLL C2
lig 166
CLA
J
605 60CHLOROPHYLL A
lig 167
KC2
J
606 45CHLOROPHYLL C2
lig 168
CLA
J
607 42CHLOROPHYLL A
lig 169
KC2
J
608 45CHLOROPHYLL C2
lig 170
CLA
J
609 41CHLOROPHYLL A
lig 171
KC2
J
610 45CHLOROPHYLL C2
lig 172
PID
J
611 46PERIDININ
lig 173
DD6
J
612 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 174
PID
J
613 46PERIDININ
lig 175
PID
J
614 46PERIDININ
lig 176
PID
J
615 46PERIDININ
lig 177
UIX
J
616 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 178
CLA
K
601 57CHLOROPHYLL A
lig 179
CLA
K
602 55CHLOROPHYLL A
lig 180
CLA
K
603 45CHLOROPHYLL A
lig 181
CLA
K
604 57CHLOROPHYLL A
lig 182
CLA
K
605 60CHLOROPHYLL A
lig 183
CLA
K
606 41CHLOROPHYLL A
lig 184
KC2
K
607 45CHLOROPHYLL C2
lig 185
CLA
K
608 45CHLOROPHYLL A
lig 186
DD6
K
609 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 187
DD6
K
610 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 188
PID
K
611 46PERIDININ
lig 189
DD6
K
612 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 190
LMG
K
613 421,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 191
DGD
K
614 47DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 192
CLA
T
601 47CHLOROPHYLL A
lig 193
CLA
T
602 45CHLOROPHYLL A
lig 194
CLA
T
603 45CHLOROPHYLL A
lig 195
CLA
T
604 41CHLOROPHYLL A
lig 196
CLA
T
605 45CHLOROPHYLL A
lig 197
CLA
T
606 45CHLOROPHYLL A
lig 198
CLA
T
607 45CHLOROPHYLL A
lig 199
KC2
T
608 45CHLOROPHYLL C2
lig 200
CLA
T
609 41CHLOROPHYLL A
lig 201
DD6
T
610 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 202
DD6
T
611 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 203
UIX
T
612 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 204
LMU
T
613 35DODECYL-ALPHA-D-MALTOSIDE
lig 205
CLA
U
601 43CHLOROPHYLL A
lig 206
KC2
U
602 45CHLOROPHYLL C2
lig 207
CLA
U
603 50CHLOROPHYLL A
lig 208
KC2
U
604 45CHLOROPHYLL C2
lig 209
CLA
U
605 60CHLOROPHYLL A
lig 210
CLA
U
606 45CHLOROPHYLL A
lig 211
DD6
U
607 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 212
PID
U
608 46PERIDININ
lig 213
CLA
a
801 65CHLOROPHYLL A
lig 214
CLA
a
802 55CHLOROPHYLL A
lig 215
CLA
a
803 50CHLOROPHYLL A
lig 216
CLA
a
804 65CHLOROPHYLL A
lig 217
CLA
a
805 65CHLOROPHYLL A
lig 218
CLA
a
806 55CHLOROPHYLL A
lig 219
CLA
a
807 65CHLOROPHYLL A
lig 220
CLA
a
808 55CHLOROPHYLL A
lig 221
CLA
a
809 47CHLOROPHYLL A
lig 222
CLA
a
810 50CHLOROPHYLL A
lig 223
CLA
a
811 48CHLOROPHYLL A
lig 224
CLA
a
812 50CHLOROPHYLL A
lig 225
CLA
a
813 48CHLOROPHYLL A
lig 226
CLA
a
814 55CHLOROPHYLL A
lig 227
CLA
a
815 60CHLOROPHYLL A
lig 228
CLA
a
816 60CHLOROPHYLL A
lig 229
CLA
a
817 55CHLOROPHYLL A
lig 230
CLA
a
818 55CHLOROPHYLL A
lig 231
CLA
a
819 60CHLOROPHYLL A
lig 232
CLA
a
820 65CHLOROPHYLL A
lig 233
CLA
a
821 65CHLOROPHYLL A
lig 234
CLA
a
822 60CHLOROPHYLL A
lig 235
CLA
a
823 65CHLOROPHYLL A
lig 236
CLA
a
824 65CHLOROPHYLL A
lig 237
CLA
a
825 65CHLOROPHYLL A
lig 238
CLA
a
826 55CHLOROPHYLL A
lig 239
CLA
a
827 65CHLOROPHYLL A
lig 240
CLA
a
828 48CHLOROPHYLL A
lig 241
CLA
a
829 65CHLOROPHYLL A
lig 242
CLA
a
830 65CHLOROPHYLL A
lig 243
CLA
a
831 55CHLOROPHYLL A
lig 244
PQN
a
832 33PHYLLOQUINONE
lig 245
BCR
a
833 40BETA-CAROTENE
lig 246
BCR
a
834 40BETA-CAROTENE
lig 247
LHG
a
835 481,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 248
BCR
a
836 40BETA-CAROTENE
lig 249
CLA
a
837 65CHLOROPHYLL A
lig 250
SF4
a
838 8IRON/SULFUR CLUSTER
lig 251
CLA
a
839 61CHLOROPHYLL A
lig 252
CLA
b
701 65CHLOROPHYLL A
lig 253
CLA
b
702 65CHLOROPHYLL A
lig 254
CLA
b
703 65CHLOROPHYLL A
lig 255
CLA
b
704 65CHLOROPHYLL A
lig 256
CLA
b
705 65CHLOROPHYLL A
lig 257
CLA
b
706 65CHLOROPHYLL A
lig 258
CLA
b
707 65CHLOROPHYLL A
lig 259
CLA
b
708 65CHLOROPHYLL A
lig 260
CLA
b
709 65CHLOROPHYLL A
lig 261
CLA
b
710 55CHLOROPHYLL A
lig 262
CLA
b
711 60CHLOROPHYLL A
lig 263
CLA
b
712 48CHLOROPHYLL A
lig 264
CLA
b
713 65CHLOROPHYLL A
lig 265
CLA
b
714 48CHLOROPHYLL A
lig 266
CLA
b
715 65CHLOROPHYLL A
lig 267
CLA
b
716 65CHLOROPHYLL A
lig 268
CLA
b
717 65CHLOROPHYLL A
lig 269
CLA
b
718 65CHLOROPHYLL A
lig 270
CLA
b
719 65CHLOROPHYLL A
lig 271
CLA
b
720 48CHLOROPHYLL A
lig 272
CLA
b
721 50CHLOROPHYLL A
lig 273
CLA
b
722 48CHLOROPHYLL A
lig 274
CLA
b
723 65CHLOROPHYLL A
lig 275
CLA
b
724 65CHLOROPHYLL A
lig 276
CLA
b
725 65CHLOROPHYLL A
lig 277
CLA
b
726 60CHLOROPHYLL A
lig 278
CLA
b
727 65CHLOROPHYLL A
lig 279
CLA
b
728 65CHLOROPHYLL A
lig 280
PQN
b
729 33PHYLLOQUINONE
lig 281
DD6
b
730 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 282
BCR
b
731 40BETA-CAROTENE
lig 283
BCR
b
732 40BETA-CAROTENE
lig 284
LMG
b
733 551,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 285
SF4
c
201 8IRON/SULFUR CLUSTER
lig 286
SF4
c
202 8IRON/SULFUR CLUSTER
lig 287
BCR
f
301 40BETA-CAROTENE
lig 288
CLA
f
302 48CHLOROPHYLL A
lig 289
CLA
f
303 48CHLOROPHYLL A
lig 290
BCR
f
304 40BETA-CAROTENE
lig 291
DGD
f
305 52DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 292
BCR
i
201 40BETA-CAROTENE
lig 293
DD6
i
202 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 294
DGD
j
201 60DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 295
CLA
j
202 56CHLOROPHYLL A
lig 296
BCR
j
203 40BETA-CAROTENE
lig 297
UIX
j
204 47 NONAENYLIDENE]CYCLOHEXYL] ETHANOATE
lig 298
LHG
j
205 371,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 299
LHG
l
401 461,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 300
CLA
l
402 60CHLOROPHYLL A
lig 301
CLA
l
403 65CHLOROPHYLL A
lig 302
CLA
l
404 55CHLOROPHYLL A
lig 303
CLA
l
405 61CHLOROPHYLL A
lig 304
CLA
l
406 65CHLOROPHYLL A
lig 305
CLA
l
407 48CHLOROPHYLL A
lig 306
CLA
l
408 47CHLOROPHYLL A
lig 307
CLA
l
409 65CHLOROPHYLL A
lig 308
CLA
l
410 48CHLOROPHYLL A
lig 309
CLA
l
411 48CHLOROPHYLL A
lig 310
CLA
l
412 65CHLOROPHYLL A
lig 311
BCR
l
413 40BETA-CAROTENE
lig 312
BCR
l
414 40BETA-CAROTENE
lig 313
BCR
l
415 40BETA-CAROTENE
lig 314
DGD
l
416 55DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 315
LMG
l
417 501,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 316
BCR
m
201 40BETA-CAROTENE
lig 317
DD6
r
201 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 318
LHG
r
202 461,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 319
CLA
r
203 48CHLOROPHYLL A
lig 320
CLA
r
204 60CHLOROPHYLL A
lig 321
DD6
r
205 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 322
DD6
r
206 43 EPOXY-BETA,BETA-CAROTENE-3,3'-DIOL
lig 323
SQD
y
301 46 GLUCOPYRANOSYL]-SN-GLYCEROL