Analysis of Ligand-Protein Contacts in PDB entry:
8JKV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 76 ligands in PDB entry 8JKV. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
A
801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
D12
A
802 12DODECANE
lig 11
OCT
A
803 8N-OCTANE
lig 12
OCT
A
804 8N-OCTANE
lig 13
C14
A
805 12TETRADECANE
lig 14
C14
A
806 14TETRADECANE
lig 15
C14
A
807 14TETRADECANE
lig 16
C14
A
808 14TETRADECANE
lig 17
C14
A
809 14TETRADECANE
lig 18
OCT
A
810 8N-OCTANE
lig 19
C14
A
811 14TETRADECANE
lig 20
OCT
A
812 8N-OCTANE
lig 21
CLR
A
813 28CHOLESTEROL
lig 22
OCT
A
814 8N-OCTANE
lig 23
C14
A
815 14TETRADECANE
lig 24
C14
A
816 14TETRADECANE
lig 25
OCT
A
817 8N-OCTANE
lig 26
D10
A
818 10DECANE
lig 27
D12
A
819 12DODECANE
lig 28
OCT
A
820 8N-OCTANE
lig 29
OCT
A
821 8N-OCTANE
lig 30
OCT
A
822 8N-OCTANE
lig 31
OCT
A
823 8N-OCTANE
lig 32
C14
A
824 12TETRADECANE
lig 33
C14
A
825 14TETRADECANE
lig 34
C14
A
826 14TETRADECANE
lig 35
C14
A
827 14TETRADECANE
lig 36
OCT
A
828 8N-OCTANE
lig 37
OCT
A
829 8N-OCTANE
lig 38
R16
A
830 16HEXADECANE
lig 39
OCT
A
831 8N-OCTANE
lig 40
OCT
A
832 8N-OCTANE
lig 41
OCT
A
833 8N-OCTANE
lig 42
OCT
A
834 8N-OCTANE
lig 43
D12
A
835 12DODECANE
lig 44
D12
B
801 12DODECANE
lig 45
NAG
B
802 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
D12
B
803 12DODECANE
lig 47
OCT
B
804 8N-OCTANE
lig 48
OCT
B
805 8N-OCTANE
lig 49
C14
B
806 12TETRADECANE
lig 50
C14
B
807 14TETRADECANE
lig 51
C14
B
808 14TETRADECANE
lig 52
C14
B
809 14TETRADECANE
lig 53
C14
B
810 14TETRADECANE
lig 54
OCT
B
811 8N-OCTANE
lig 55
C14
B
812 14TETRADECANE
lig 56
OCT
B
813 8N-OCTANE
lig 57
CLR
B
814 28CHOLESTEROL
lig 58
OCT
B
815 8N-OCTANE
lig 59
C14
B
816 14TETRADECANE
lig 60
C14
B
817 14TETRADECANE
lig 61
OCT
B
818 8N-OCTANE
lig 62
D10
B
819 10DECANE
lig 63
D12
B
820 12DODECANE
lig 64
OCT
B
821 8N-OCTANE
lig 65
OCT
B
822 8N-OCTANE
lig 66
OCT
B
823 8N-OCTANE
lig 67
C14
B
824 12TETRADECANE
lig 68
C14
B
825 14TETRADECANE
lig 69
C14
B
826 14TETRADECANE
lig 70
C14
B
827 14TETRADECANE
lig 71
OCT
B
828 8N-OCTANE
lig 72
OCT
B
829 8N-OCTANE
lig 73
R16
B
830 16HEXADECANE
lig 74
OCT
B
831 8N-OCTANE
lig 75
OCT
B
832 8N-OCTANE
lig 76
OCT
B
833 8N-OCTANE