Analysis of Ligand-Protein Contacts in PDB entry:
8ORP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 54 ligands in PDB entry 8ORP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BGC
C
1 11BETA-D-GLUCOPYRANOSE
lig 2
GLC
C
2 11ALPHA-D-GLUCOPYRANOSE
lig 3
RY7
C
3 21 (HYDROXYMETHYL)CYCLOHEXYL]AMINO}-ALPHA-D-
lig 4
GLC
D
1 11ALPHA-D-GLUCOPYRANOSE
lig 5
RY7
D
2 21 (HYDROXYMETHYL)CYCLOHEXYL]AMINO}-ALPHA-D-
lig 6
BGC
E
1 11BETA-D-GLUCOPYRANOSE
lig 7
GLC
E
2 11ALPHA-D-GLUCOPYRANOSE
lig 8
RY7
E
3 21 (HYDROXYMETHYL)CYCLOHEXYL]AMINO}-ALPHA-D-
lig 9
GLC
F
1 11ALPHA-D-GLUCOPYRANOSE
lig 10
RY7
F
2 21 (HYDROXYMETHYL)CYCLOHEXYL]AMINO}-ALPHA-D-
lig 11
CL
A
501 1CHLORIDE ION
lig 12
EDO
A
502 41,2-ETHANEDIOL
lig 13
EDO
A
503 41,2-ETHANEDIOL
lig 14
EDO
A
504 41,2-ETHANEDIOL
lig 15
EDO
A
505 41,2-ETHANEDIOL
lig 16
EDO
A
506 41,2-ETHANEDIOL
lig 17
EDO
A
507 41,2-ETHANEDIOL
lig 18
EDO
A
508 41,2-ETHANEDIOL
lig 19
EDO
A
509 41,2-ETHANEDIOL
lig 20
EDO
A
510 41,2-ETHANEDIOL
lig 21
EDO
A
511 41,2-ETHANEDIOL
lig 22
EDO
A
512 41,2-ETHANEDIOL
lig 23
EDO
A
513 41,2-ETHANEDIOL
lig 24
EDO
A
514 41,2-ETHANEDIOL
lig 25
EDO
A
515 41,2-ETHANEDIOL
lig 26
EDO
A
516 41,2-ETHANEDIOL
lig 27
EDO
A
517 41,2-ETHANEDIOL
lig 28
EDO
A
518 41,2-ETHANEDIOL
lig 29
EDO
A
519 41,2-ETHANEDIOL
lig 30
SR
A
520 1STRONTIUM ION
lig 31
SR
A
521 1STRONTIUM ION
lig 32
CL
B
501 1CHLORIDE ION
lig 33
EDO
B
502 41,2-ETHANEDIOL
lig 34
EDO
B
503 41,2-ETHANEDIOL
lig 35
EDO
B
504 41,2-ETHANEDIOL
lig 36
EDO
B
505 41,2-ETHANEDIOL
lig 37
EDO
B
506 41,2-ETHANEDIOL
lig 38
EDO
B
507 41,2-ETHANEDIOL
lig 39
EDO
B
508 41,2-ETHANEDIOL
lig 40
EDO
B
509 41,2-ETHANEDIOL
lig 41
EDO
B
510 41,2-ETHANEDIOL
lig 42
EDO
B
511 41,2-ETHANEDIOL
lig 43
EDO
B
512 41,2-ETHANEDIOL
lig 44
EDO
B
513 41,2-ETHANEDIOL
lig 45
EDO
B
514 41,2-ETHANEDIOL
lig 46
EDO
B
515 41,2-ETHANEDIOL
lig 47
EDO
B
516 41,2-ETHANEDIOL
lig 48
EDO
B
517 41,2-ETHANEDIOL
lig 49
EDO
B
518 41,2-ETHANEDIOL
lig 50
EDO
B
519 41,2-ETHANEDIOL
lig 51
EDO
B
520 41,2-ETHANEDIOL
lig 52
EDO
B
521 41,2-ETHANEDIOL
lig 53
SR
B
522 1STRONTIUM ION
lig 54
SR
B
523 1STRONTIUM ION