Analysis of Ligand-Protein Contacts in PDB entry:
8P0D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 7 ligands in PDB entry 8P0D. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CSD
A
38 83-SULFINOALANINE
lig 2
SEP
B
166 10PHOSPHOSERINE
lig 3
GOL
A
301 6GLYCEROL
lig 4
PEG
A
302 7DI(HYDROXYETHYL)ETHER
lig 5
CL
A
303 1CHLORIDE ION
lig 6
MG
A
304 1MAGNESIUM ION
lig 7
MG
A
305 1MAGNESIUM ION