Analysis of Ligand-Protein Contacts in PDB entry:
8P5K


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 21 ligands in PDB entry 8P5K. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
180 11PHOSPHOTHREONINE
lig 2
TPO
B
180 11PHOSPHOTHREONINE
lig 3
TPO
C
180 11PHOSPHOTHREONINE
lig 4
TPO
D
180 11PHOSPHOTHREONINE
lig 5
HVH
A
301 32 YL]AMINO]PROPYL]CYCLOBUTANECARBOXAMIDE
lig 6
GOL
A
302 6GLYCEROL
lig 7
MG
A
303 1MAGNESIUM ION
lig 8
MG
A
304 1MAGNESIUM ION
lig 9
PO4
A
305 5PHOSPHATE ION
lig 10
HVH
B
301 32 YL]AMINO]PROPYL]CYCLOBUTANECARBOXAMIDE
lig 11
GOL
B
302 6GLYCEROL
lig 12
MG
B
303 1MAGNESIUM ION
lig 13
MG
B
304 1MAGNESIUM ION
lig 14
HVH
C
301 32 YL]AMINO]PROPYL]CYCLOBUTANECARBOXAMIDE
lig 15
GOL
C
302 6GLYCEROL
lig 16
MG
C
303 1MAGNESIUM ION
lig 17
MG
C
304 1MAGNESIUM ION
lig 18
PO4
C
305 5PHOSPHATE ION
lig 19
HVH
D
301 32 YL]AMINO]PROPYL]CYCLOBUTANECARBOXAMIDE
lig 20
MG
D
302 1MAGNESIUM ION
lig 21
MG
D
303 1MAGNESIUM ION