Analysis of Ligand-Protein Contacts in PDB entry:
8P7D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 8P7D. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
4AC
R
12 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 2
OMG
R
18 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 3
H2U
R
20 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 4
M2G
R
26 25N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
lig 5
JMH
R
32 213-METHYLCYTIDINE- 5'-MONOPHOSPHATE
lig 6
6IA
R
37 27N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE
lig 7
PSU
R
39 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 8
OMU
R
44 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 9
5MC
R
48 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 10
5MU
R
54 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 11
PSU
R
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 12
1MA
R
58 236-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 13
SAH
A
301 26S-ADENOSYL-L-HOMOCYSTEINE
lig 14
MG
R
101 1MAGNESIUM ION
lig 15
MG
R
102 1MAGNESIUM ION
lig 16
MG
R
103 1MAGNESIUM ION