Analysis of Ligand-Protein Contacts in PDB entry:
8PAW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 11 ligands in PDB entry 8PAW. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
A
177 11PHOSPHOTHREONINE
lig 2
TPO
A
183 11PHOSPHOTHREONINE
lig 3
TPO
B
177 11PHOSPHOTHREONINE
lig 4
TPO
B
183 11PHOSPHOTHREONINE
lig 5
ASP
A
401 8ASPARTIC ACID
lig 6
XQL
A
402 34 METHOXYETHYL)UREA
lig 7
GOL
A
403 6GLYCEROL
lig 8
CXS
A
404 143-CYCLOHEXYL-1-PROPYLSULFONIC ACID
lig 9
XQL
B
1001 34 METHOXYETHYL)UREA
lig 10
GOL
B
1002 6GLYCEROL
lig 11
CXS
B
1003 143-CYCLOHEXYL-1-PROPYLSULFONIC ACID