Analysis of Ligand-Protein Contacts in PDB entry:
8PJN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 9 ligands in PDB entry 8PJN. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
2
164 10PHOSPHOSERINE
lig 2
SEP
2
165 10PHOSPHOSERINE
lig 3
SEP
2
166 10PHOSPHOSERINE
lig 4
SEP
2
168 10PHOSPHOSERINE
lig 5
SEP
2
169 10PHOSPHOSERINE
lig 6
SEP
2
171 10PHOSPHOSERINE
lig 7
SEP
2
174 10PHOSPHOSERINE
lig 8
ZN
b
501 1ZINC ION
lig 9
ZN
i
401 1ZINC ION