Analysis of Ligand-Protein Contacts in PDB entry:
8PMK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 8PMK. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BYN
A
601 36HYDROXYLATED PRENYL-FMN
lig 2
FE
A
602 1FE (III) ION
lig 3
FE
A
603 1FE (III) ION
lig 4
FE
A
604 1FE (III) ION
lig 5
K
A
605 1POTASSIUM ION
lig 6
BYN
B
601 36HYDROXYLATED PRENYL-FMN
lig 7
FE
B
602 1FE (III) ION
lig 8
FE
B
603 1FE (III) ION
lig 9
FE
B
604 1FE (III) ION
lig 10
K
B
605 1POTASSIUM ION
lig 11
BYN
C
601 36HYDROXYLATED PRENYL-FMN
lig 12
FE
C
602 1FE (III) ION
lig 13
FE
C
603 1FE (III) ION
lig 14
FE
C
604 1FE (III) ION
lig 15
K
C
605 1POTASSIUM ION
lig 16
BYN
D
601 36HYDROXYLATED PRENYL-FMN
lig 17
FE
D
602 1FE (III) ION
lig 18
FE
D
603 1FE (III) ION
lig 19
FE
D
604 1FE (III) ION
lig 20
K
D
605 1POTASSIUM ION
lig 21
BYN
E
601 36HYDROXYLATED PRENYL-FMN
lig 22
FE
E
602 1FE (III) ION
lig 23
FE
E
603 1FE (III) ION
lig 24
FE
E
604 1FE (III) ION
lig 25
K
E
605 1POTASSIUM ION
lig 26
BYN
F
601 36HYDROXYLATED PRENYL-FMN
lig 27
FE
F
602 1FE (III) ION
lig 28
FE
F
603 1FE (III) ION
lig 29
FE
F
604 1FE (III) ION
lig 30
K
F
605 1POTASSIUM ION