Analysis of Ligand-Protein Contacts in PDB entry:
8PN9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 37 ligands in PDB entry 8PN9. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
J
6 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
J
7 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
J
8 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 14
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
K
6 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
K
7 11ALPHA-D-MANNOPYRANOSE
lig 18
NDG
N
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 19
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 21
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 22
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
N
6 11ALPHA-D-MANNOPYRANOSE
lig 24
GLC
N
7 11ALPHA-D-GLUCOPYRANOSE
lig 25
GLC
N
8 11ALPHA-D-GLUCOPYRANOSE
lig 26
GLC
N
9 11ALPHA-D-GLUCOPYRANOSE
lig 27
MAN
N
10 11ALPHA-D-MANNOPYRANOSE
lig 28
MAN
N
11 11ALPHA-D-MANNOPYRANOSE
lig 29
KZB
A
801 32 18}]ICOSANE-6,2'-OXANE]-16-YL]OXY-OXANE-3
lig 30
KZB
A
802 32 18}]ICOSANE-6,2'-OXANE]-16-YL]OXY-OXANE-3
lig 31
EGY
A
803 43 PHOSPHADOCOSAN-1-AMINIUM
lig 32
MN
A
804 1MANGANESE (II) ION
lig 33
OTP
A
805 49 TRIHYDROGEN DIPHOSPHATE
lig 34
ZXT
A
806 26 2-PYRROLIDIN-1-YL-BENZAMIDE
lig 35
KZB
F
701 32 18}]ICOSANE-6,2'-OXANE]-16-YL]OXY-OXANE-3
lig 36
EGY
F
702 43 PHOSPHADOCOSAN-1-AMINIUM
lig 37
KZB
G
501 32 18}]ICOSANE-6,2'-OXANE]-16-YL]OXY-OXANE-3