Analysis of Ligand-Protein Contacts in PDB entry:
8PPS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 8PPS. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GOL
A
801 6GLYCEROL
lig 2
GOL
A
802 6GLYCEROL
lig 3
GOL
A
803 6GLYCEROL
lig 4
EDO
A
804 41,2-ETHANEDIOL
lig 5
EDO
A
805 41,2-ETHANEDIOL
lig 6
BME
A
806 4BETA-MERCAPTOETHANOL
lig 7
MG
A
807 1MAGNESIUM ION
lig 8
GOL
B
801 6GLYCEROL
lig 9
BME
B
802 4BETA-MERCAPTOETHANOL
lig 10
EDO
B
803 41,2-ETHANEDIOL
lig 11
EDO
B
804 41,2-ETHANEDIOL
lig 12
MG
B
805 1MAGNESIUM ION