Analysis of Ligand-Protein Contacts in PDB entry:
8Q0A


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 95 ligands in PDB entry 8Q0A. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
AYA
Y
1 8N-ACETYLALANINE
lig 10
AYA
b
1 8N-ACETYLALANINE
lig 11
AME
d
1 11N-ACETYLMETHIONINE
lig 12
SAC
i
1 9N-ACETYL-SERINE
lig 13
SAC
m
1 9N-ACETYL-SERINE
lig 14
AME
q
1 11N-ACETYLMETHIONINE
lig 15
AYA
r
1 8N-ACETYLALANINE
lig 16
3PE
A
201 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 17
3PE
A
202 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 18
PC1
A
203 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 19
PC1
A
204 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 20
PC1
A
205 331,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 21
PLC
A
206 38DIUNDECYL PHOSPHATIDYL CHOLINE
lig 22
SF4
B
201 8IRON/SULFUR CLUSTER
lig 23
PC1
B
202 461,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 24
PC1
B
203 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 25
PLC
B
204 37DIUNDECYL PHOSPHATIDYL CHOLINE
lig 26
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 27
FMN
F
501 31FLAVIN MONONUCLEOTIDE
lig 28
SF4
F
502 8IRON/SULFUR CLUSTER
lig 29
SF4
G
801 8IRON/SULFUR CLUSTER
lig 30
SF4
G
802 8IRON/SULFUR CLUSTER
lig 31
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 32
K
G
804 1POTASSIUM ION
lig 33
CDL
H
401 83CARDIOLIPIN
lig 34
PC1
H
402 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 35
PC1
H
403 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 36
SF4
I
201 8IRON/SULFUR CLUSTER
lig 37
SF4
I
202 8IRON/SULFUR CLUSTER
lig 38
3PE
I
203 381,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 39
PC1
I
204 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 40
CDL
J
201 70CARDIOLIPIN
lig 41
3PE
J
202 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 42
3PE
J
203 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 43
PLC
J
204 38DIUNDECYL PHOSPHATIDYL CHOLINE
lig 44
CDL
L
701 76CARDIOLIPIN
lig 45
3PE
L
702 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 46
3PE
L
703 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 47
3PE
L
704 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 48
3PE
L
705 231,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 49
3PE
L
706 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 50
3PE
L
707 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 51
3PE
L
708 391,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 52
PC1
L
709 451,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 53
PLC
L
710 31DIUNDECYL PHOSPHATIDYL CHOLINE
lig 54
ZN
M
601 1ZINC ION
lig 55
CDL
M
602 100CARDIOLIPIN
lig 56
3PE
M
603 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 57
3PE
M
604 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 58
PC1
M
605 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 59
PC1
M
606 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 60
CDL
N
401 80CARDIOLIPIN
lig 61
3PE
N
402 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 62
MG
O
401 1MAGNESIUM ION
lig 63
DGT
O
402 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 64
PLC
O
403 32DIUNDECYL PHOSPHATIDYL CHOLINE
lig 65
NDP
P
501 48 PHOSPHATE
lig 66
3PE
P
502 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 67
3PE
P
503 321,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 68
PLC
P
504 27DIUNDECYL PHOSPHATIDYL CHOLINE
lig 69
ZN
R
201 1ZINC ION
lig 70
EHZ
T
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 71
EHZ
U
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 72
CDL
X
201 100CARDIOLIPIN
lig 73
3PE
Y
201 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 74
3PE
Y
202 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 75
PC1
Y
203 451,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 76
3PE
Z
201 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 77
PC1
Z
202 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 78
3PE
b
101 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 79
3PE
b
102 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 80
3PE
b
103 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 81
CDL
d
201 65CARDIOLIPIN
lig 82
PC1
d
202 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 83
PLC
d
203 36DIUNDECYL PHOSPHATIDYL CHOLINE
lig 84
3PE
e
201 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 85
PLC
g
201 32DIUNDECYL PHOSPHATIDYL CHOLINE
lig 86
PC1
h
201 471,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 87
CHD
i
201 29CHOLIC ACID
lig 88
CDL
i
202 80CARDIOLIPIN
lig 89
3PE
m
201 501,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 90
3PE
m
202 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 91
3PE
m
203 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 92
MYR
o
201 15MYRISTIC ACID
lig 93
3PE
q
201 211,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 94
PC1
q
202 381,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 95
CDL
r
201 61CARDIOLIPIN