Analysis of Ligand-Protein Contacts in PDB entry:
8Q0J


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 51 ligands in PDB entry 8Q0J. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
AYA
b
1 8N-ACETYLALANINE
lig 10
AME
d
1 11N-ACETYLMETHIONINE
lig 11
SAC
i
1 9N-ACETYL-SERINE
lig 12
SAC
m
1 9N-ACETYL-SERINE
lig 13
AME
q
1 11N-ACETYLMETHIONINE
lig 14
AYA
r
1 8N-ACETYLALANINE
lig 15
3PE
A
201 431,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 16
PC1
A
202 501,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 17
SF4
B
201 8IRON/SULFUR CLUSTER
lig 18
PC1
B
202 511,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 19
3PE
D
501 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 20
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 21
SF4
F
501 8IRON/SULFUR CLUSTER
lig 22
FMN
F
502 31FLAVIN MONONUCLEOTIDE
lig 23
K
G
801 1POTASSIUM ION
lig 24
FES
G
802 4FE2/S2 (INORGANIC) CLUSTER
lig 25
SF4
G
803 8IRON/SULFUR CLUSTER
lig 26
SF4
G
804 8IRON/SULFUR CLUSTER
lig 27
PC1
H
401 431,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 28
PC1
H
402 371,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 29
SF4
I
201 8IRON/SULFUR CLUSTER
lig 30
SF4
I
202 8IRON/SULFUR CLUSTER
lig 31
3PE
I
203 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 32
3PE
J
201 391,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 33
3PE
M
501 381,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 34
3PE
N
401 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 35
CDL
N
402 73CARDIOLIPIN
lig 36
DGT
O
401 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 37
MG
O
402 1MAGNESIUM ION
lig 38
NDP
P
501 48 PHOSPHATE
lig 39
ZN
R
201 1ZINC ION
lig 40
EHZ
T
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 41
EHZ
U
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 42
CDL
X
201 79CARDIOLIPIN
lig 43
3PE
Y
601 391,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 44
3PE
Z
201 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 45
3PE
d
201 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 46
PC1
d
202 331,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 47
CDL
d
203 65CARDIOLIPIN
lig 48
3PE
h
201 321,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 49
CHD
i
201 29CHOLIC ACID
lig 50
MYR
o
201 15MYRISTIC ACID
lig 51
CDL
q
201 60CARDIOLIPIN