Analysis of Ligand-Protein Contacts in PDB entry:
8Q0M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 103 ligands in PDB entry 8Q0M. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
AYA
Y
1 8N-ACETYLALANINE
lig 10
AYA
b
1 8N-ACETYLALANINE
lig 11
AME
d
1 11N-ACETYLMETHIONINE
lig 12
SAC
i
1 9N-ACETYL-SERINE
lig 13
SAC
m
1 9N-ACETYL-SERINE
lig 14
AME
q
1 11N-ACETYLMETHIONINE
lig 15
AYA
r
1 8N-ACETYLALANINE
lig 16
3PE
A
201 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 17
3PE
A
202 371,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 18
3PE
A
203 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 19
PC1
A
204 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 20
PC1
A
205 331,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 21
PLC
A
206 33DIUNDECYL PHOSPHATIDYL CHOLINE
lig 22
SF4
B
201 8IRON/SULFUR CLUSTER
lig 23
U10
B
202 63UBIQUINONE-10
lig 24
PC1
B
203 461,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 25
PC1
B
204 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 26
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 27
FMN
F
501 31FLAVIN MONONUCLEOTIDE
lig 28
SF4
F
502 8IRON/SULFUR CLUSTER
lig 29
SF4
G
801 8IRON/SULFUR CLUSTER
lig 30
SF4
G
802 8IRON/SULFUR CLUSTER
lig 31
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 32
K
G
804 1POTASSIUM ION
lig 33
PC1
H
401 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 34
PC1
H
402 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 35
PC1
H
403 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 36
CDL
H
404 81CARDIOLIPIN
lig 37
SF4
I
201 8IRON/SULFUR CLUSTER
lig 38
SF4
I
202 8IRON/SULFUR CLUSTER
lig 39
PC1
I
203 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 40
PC1
I
204 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 41
3PE
J
201 291,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 42
3PE
J
202 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 43
PC1
J
203 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 44
PLC
J
204 37DIUNDECYL PHOSPHATIDYL CHOLINE
lig 45
3PE
K
101 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 46
3PE
L
701 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 47
PC1
L
702 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 48
PC1
L
703 471,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 49
PLC
L
704 42DIUNDECYL PHOSPHATIDYL CHOLINE
lig 50
CDL
L
705 76CARDIOLIPIN
lig 51
ZN
M
601 1ZINC ION
lig 52
PC1
M
602 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 53
PLC
M
603 28DIUNDECYL PHOSPHATIDYL CHOLINE
lig 54
CDL
M
604 100CARDIOLIPIN
lig 55
3PE
N
401 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 56
3PE
N
402 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 57
3PE
N
403 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 58
CDL
N
404 100CARDIOLIPIN
lig 59
DGT
O
401 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 60
MG
O
402 1MAGNESIUM ION
lig 61
3PE
O
403 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 62
PLC
O
404 35DIUNDECYL PHOSPHATIDYL CHOLINE
lig 63
NDP
P
501 48 PHOSPHATE
lig 64
3PE
P
502 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 65
PLC
P
503 42DIUNDECYL PHOSPHATIDYL CHOLINE
lig 66
PLC
P
504 32DIUNDECYL PHOSPHATIDYL CHOLINE
lig 67
CDL
P
505 59CARDIOLIPIN
lig 68
ZN
R
201 1ZINC ION
lig 69
EHZ
T
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 70
EHZ
U
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 71
3PE
Y
201 271,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 72
3PE
Y
202 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 73
3PE
Y
203 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 74
3PE
Y
204 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 75
3PE
Y
205 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 76
3PE
Y
206 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 77
3PE
Y
207 431,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 78
PLC
Y
208 42DIUNDECYL PHOSPHATIDYL CHOLINE
lig 79
3PE
Z
201 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 80
3PE
Z
202 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 81
PLC
Z
203 34DIUNDECYL PHOSPHATIDYL CHOLINE
lig 82
3PE
b
101 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 83
CDL
d
201 65CARDIOLIPIN
lig 84
CDL
d
202 86CARDIOLIPIN
lig 85
3PE
e
201 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 86
PC1
e
202 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 87
3PE
f
101 341,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 88
3PE
f
102 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 89
PLC
g
201 42DIUNDECYL PHOSPHATIDYL CHOLINE
lig 90
PC1
h
201 471,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 91
CDL
h
202 80CARDIOLIPIN
lig 92
CHD
i
201 29CHOLIC ACID
lig 93
3PE
i
202 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 94
3PE
m
201 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 95
3PE
m
202 321,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 96
3PE
m
203 501,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 97
3PE
m
204 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 98
PC1
m
205 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 99
MYR
o
201 15MYRISTIC ACID
lig 100
3PE
q
201 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 101
PC1
q
202 491,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 102
3PE
r
201 341,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 103
CDL
r
202 61CARDIOLIPIN