Analysis of Ligand-Protein Contacts in PDB entry:
8Q0O


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 92 ligands in PDB entry 8Q0O. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
AYA
Y
1 8N-ACETYLALANINE
lig 10
AYA
b
1 8N-ACETYLALANINE
lig 11
AME
d
1 11N-ACETYLMETHIONINE
lig 12
SAC
i
1 9N-ACETYL-SERINE
lig 13
SAC
m
1 9N-ACETYL-SERINE
lig 14
AME
q
1 11N-ACETYLMETHIONINE
lig 15
AYA
r
1 8N-ACETYLALANINE
lig 16
3PE
A
201 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 17
PC1
A
202 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 18
PC1
A
203 411,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 19
SF4
B
201 8IRON/SULFUR CLUSTER
lig 20
PC1
B
202 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 21
PLC
B
203 28DIUNDECYL PHOSPHATIDYL CHOLINE
lig 22
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 23
SF4
F
501 8IRON/SULFUR CLUSTER
lig 24
FMN
F
502 31FLAVIN MONONUCLEOTIDE
lig 25
SF4
G
801 8IRON/SULFUR CLUSTER
lig 26
SF4
G
802 8IRON/SULFUR CLUSTER
lig 27
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 28
K
G
804 1POTASSIUM ION
lig 29
3PE
H
401 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 30
3PE
H
402 431,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 31
3PE
H
403 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 32
PC1
H
404 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 33
PC1
H
405 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 34
SF4
I
201 8IRON/SULFUR CLUSTER
lig 35
SF4
I
202 8IRON/SULFUR CLUSTER
lig 36
PC1
I
203 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 37
3PE
J
201 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 38
3PE
J
202 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 39
PLC
J
203 35DIUNDECYL PHOSPHATIDYL CHOLINE
lig 40
3PE
K
101 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 41
PC1
L
701 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 42
3PE
L
702 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 43
PLC
L
703 42DIUNDECYL PHOSPHATIDYL CHOLINE
lig 44
CDL
L
704 70CARDIOLIPIN
lig 45
ZN
M
601 1ZINC ION
lig 46
3PE
M
602 501,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 47
3PE
M
603 321,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 48
3PE
M
604 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 49
PLC
M
605 32DIUNDECYL PHOSPHATIDYL CHOLINE
lig 50
CDL
M
606 100CARDIOLIPIN
lig 51
3PE
N
401 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 52
3PE
N
402 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 53
CDL
N
403 84CARDIOLIPIN
lig 54
DGT
O
401 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 55
MG
O
402 1MAGNESIUM ION
lig 56
PLC
O
403 42DIUNDECYL PHOSPHATIDYL CHOLINE
lig 57
NDP
P
501 48 PHOSPHATE
lig 58
ZN
R
201 1ZINC ION
lig 59
EHZ
T
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 60
EHZ
U
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 61
CDL
X
201 86CARDIOLIPIN
lig 62
3PE
Y
201 271,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 63
3PE
Y
202 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 64
3PE
Y
203 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 65
3PE
Y
204 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 66
3PE
Y
205 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 67
3PE
Y
206 461,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 68
PC1
Y
207 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 69
PLC
Y
208 37DIUNDECYL PHOSPHATIDYL CHOLINE
lig 70
3PE
Z
201 371,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 71
PC1
Z
202 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 72
PLC
Z
203 34DIUNDECYL PHOSPHATIDYL CHOLINE
lig 73
3PE
b
101 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 74
3PE
b
102 371,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 75
3PE
b
103 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 76
PLC
b
104 38DIUNDECYL PHOSPHATIDYL CHOLINE
lig 77
3PE
d
201 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 78
PC1
d
202 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 79
CDL
d
203 65CARDIOLIPIN
lig 80
3PE
f
101 301,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 81
PC1
g
201 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 82
PC1
h
201 401,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 83
PLC
h
202 28DIUNDECYL PHOSPHATIDYL CHOLINE
lig 84
CHD
i
201 29CHOLIC ACID
lig 85
CDL
i
202 72CARDIOLIPIN
lig 86
3PE
m
201 301,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 87
PC1
m
202 401,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 88
MYR
o
201 15MYRISTIC ACID
lig 89
3PE
q
201 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 90
PC1
q
202 231,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 91
CDL
q
203 58CARDIOLIPIN
lig 92
3PE
r
201 281,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI